Omics module#
Index > Omics
Auto-generated documentation for Omics type annotations stubs module types-boto3-omics.
How to install#
Generate locally (recommended)#
You can generate type annotations for boto3
package locally with mypy-boto3-builder
.
Use uv for build isolation.
- Run mypy-boto3-builder in your package root directory:
uvx --with 'boto3==1.36.26' mypy-boto3-builder
- Select
boto3
AWS SDK. - Add
Omics
service. - Use provided commands to install generated packages.
VSCode extension#
Add AWS Boto3
extension to your VSCode and run AWS boto3: Quick Start
command.
Click Modify
and select boto3 common
and Omics
.
From PyPI with pip#
Install types-boto3
for Omics
service.
# install with boto3 type annotations
python -m pip install 'types-boto3[omics]'
# Lite version does not provide session.client/resource overloads
# it is more RAM-friendly, but requires explicit type annotations
python -m pip install 'types-boto3-lite[omics]'
# standalone installation
python -m pip install types-boto3-omics
How to uninstall#
python -m pip uninstall -y types-boto3-omics
Usage#
Code samples can be found in Examples.
OmicsClient#
Type annotations and code completion for boto3.client("omics")
as OmicsClient
boto3 documentation
# OmicsClient usage example
from boto3.session import Session
from types_boto3_omics.client import OmicsClient
def get_client() -> OmicsClient:
return Session().client("omics")
Paginators#
Type annotations and code completion for paginators
from boto3.client("omics").get_paginator("...")
.
# ListAnnotationImportJobsPaginator usage example
from boto3.session import Session
from types_boto3_omics.paginator import ListAnnotationImportJobsPaginator
def get_list_annotation_import_jobs_paginator() -> ListAnnotationImportJobsPaginator:
return Session().client("omics").get_paginator("list_annotation_import_jobs"))
- ListAnnotationImportJobsPaginator
- ListAnnotationStoreVersionsPaginator
- ListAnnotationStoresPaginator
- ListMultipartReadSetUploadsPaginator
- ListReadSetActivationJobsPaginator
- ListReadSetExportJobsPaginator
- ListReadSetImportJobsPaginator
- ListReadSetUploadPartsPaginator
- ListReadSetsPaginator
- ListReferenceImportJobsPaginator
- ListReferenceStoresPaginator
- ListReferencesPaginator
- ListRunCachesPaginator
- ListRunGroupsPaginator
- ListRunTasksPaginator
- ListRunsPaginator
- ListSequenceStoresPaginator
- ListSharesPaginator
- ListVariantImportJobsPaginator
- ListVariantStoresPaginator
- ListWorkflowsPaginator
Waiters#
Type annotations and code completion for waiters
from boto3.client("omics").get_waiter("...")
.
# AnnotationImportJobCreatedWaiter usage example
from boto3.session import Session
from types_boto3_omics.waiter import AnnotationImportJobCreatedWaiter
def get_annotation_import_job_created_waiter() -> AnnotationImportJobCreatedWaiter:
return Session().client("omics").get_waiter("annotation_import_job_created")
- AnnotationImportJobCreatedWaiter
- AnnotationStoreCreatedWaiter
- AnnotationStoreDeletedWaiter
- AnnotationStoreVersionCreatedWaiter
- AnnotationStoreVersionDeletedWaiter
- ReadSetActivationJobCompletedWaiter
- ReadSetExportJobCompletedWaiter
- ReadSetImportJobCompletedWaiter
- ReferenceImportJobCompletedWaiter
- RunCompletedWaiter
- RunRunningWaiter
- TaskCompletedWaiter
- TaskRunningWaiter
- VariantImportJobCreatedWaiter
- VariantStoreCreatedWaiter
- VariantStoreDeletedWaiter
- WorkflowActiveWaiter
Literals#
Type annotations for literals used in methods and schema.
# AcceleratorsType usage example
from types_boto3_omics.literals import AcceleratorsType
def get_value() -> AcceleratorsType:
return "GPU"
- AcceleratorsType
- AnnotationImportJobCreatedWaiterName
- AnnotationStoreCreatedWaiterName
- AnnotationStoreDeletedWaiterName
- AnnotationStoreVersionCreatedWaiterName
- AnnotationStoreVersionDeletedWaiterName
- AnnotationTypeType
- CacheBehaviorType
- CreationTypeType
- ETagAlgorithmFamilyType
- ETagAlgorithmType
- EncryptionTypeType
- FileTypeType
- FormatToHeaderKeyType
- JobStatusType
- ListAnnotationImportJobsPaginatorName
- ListAnnotationStoreVersionsPaginatorName
- ListAnnotationStoresPaginatorName
- ListMultipartReadSetUploadsPaginatorName
- ListReadSetActivationJobsPaginatorName
- ListReadSetExportJobsPaginatorName
- ListReadSetImportJobsPaginatorName
- ListReadSetUploadPartsPaginatorName
- ListReadSetsPaginatorName
- ListReferenceImportJobsPaginatorName
- ListReferenceStoresPaginatorName
- ListReferencesPaginatorName
- ListRunCachesPaginatorName
- ListRunGroupsPaginatorName
- ListRunTasksPaginatorName
- ListRunsPaginatorName
- ListSequenceStoresPaginatorName
- ListSharesPaginatorName
- ListVariantImportJobsPaginatorName
- ListVariantStoresPaginatorName
- ListWorkflowsPaginatorName
- ReadSetActivationJobCompletedWaiterName
- ReadSetActivationJobItemStatusType
- ReadSetActivationJobStatusType
- ReadSetExportJobCompletedWaiterName
- ReadSetExportJobItemStatusType
- ReadSetExportJobStatusType
- ReadSetFileType
- ReadSetImportJobCompletedWaiterName
- ReadSetImportJobItemStatusType
- ReadSetImportJobStatusType
- ReadSetPartSourceType
- ReadSetStatusType
- ReferenceCreationTypeType
- ReferenceFileType
- ReferenceImportJobCompletedWaiterName
- ReferenceImportJobItemStatusType
- ReferenceImportJobStatusType
- ReferenceStatusType
- ResourceOwnerType
- RunCacheStatusType
- RunCompletedWaiterName
- RunExportType
- RunLogLevelType
- RunRetentionModeType
- RunRunningWaiterName
- RunStatusType
- SchemaValueTypeType
- SequenceStoreStatusType
- ShareResourceTypeType
- ShareStatusType
- StorageTypeType
- StoreFormatType
- StoreStatusType
- StoreTypeType
- TaskCompletedWaiterName
- TaskRunningWaiterName
- TaskStatusType
- VariantImportJobCreatedWaiterName
- VariantStoreCreatedWaiterName
- VariantStoreDeletedWaiterName
- VersionStatusType
- WorkflowActiveWaiterName
- WorkflowEngineType
- WorkflowExportType
- WorkflowStatusType
- WorkflowTypeType
- OmicsServiceName
- ServiceName
- ResourceServiceName
- PaginatorName
- WaiterName
- RegionName
Type definitions#
Type annotations for type definitions used in methods and schema.
- AbortMultipartReadSetUploadRequestTypeDef
- AcceptShareRequestTypeDef
- ResponseMetadataTypeDef
- TimestampTypeDef
- ActivateReadSetJobItemTypeDef
- ActivateReadSetSourceItemTypeDef
- AnnotationImportItemDetailTypeDef
- AnnotationImportItemSourceTypeDef
- AnnotationImportJobItemTypeDef
- ReferenceItemTypeDef
- SseConfigTypeDef
- AnnotationStoreVersionItemTypeDef
- BatchDeleteReadSetRequestTypeDef
- ReadSetBatchErrorTypeDef
- BlobTypeDef
- CancelAnnotationImportRequestTypeDef
- CancelRunRequestTypeDef
- CancelVariantImportRequestTypeDef
- CompleteReadSetUploadPartListItemTypeDef
- CreateMultipartReadSetUploadRequestTypeDef
- CreateRunCacheRequestTypeDef
- CreateRunGroupRequestTypeDef
- S3AccessConfigTypeDef
- SequenceStoreS3AccessTypeDef
- CreateShareRequestTypeDef
- WorkflowParameterTypeDef
- DeleteAnnotationStoreRequestTypeDef
- DeleteAnnotationStoreVersionsRequestTypeDef
- VersionDeleteErrorTypeDef
- DeleteReferenceRequestTypeDef
- DeleteReferenceStoreRequestTypeDef
- DeleteRunCacheRequestTypeDef
- DeleteRunGroupRequestTypeDef
- DeleteRunRequestTypeDef
- DeleteS3AccessPolicyRequestTypeDef
- DeleteSequenceStoreRequestTypeDef
- DeleteShareRequestTypeDef
- DeleteVariantStoreRequestTypeDef
- DeleteWorkflowRequestTypeDef
- ETagTypeDef
- ExportReadSetDetailTypeDef
- ExportReadSetJobDetailTypeDef
- ExportReadSetTypeDef
- ReadSetS3AccessTypeDef
- FilterTypeDef
- VcfOptionsTypeDef
- GetAnnotationImportRequestTypeDef
- WaiterConfigTypeDef
- GetAnnotationStoreRequestTypeDef
- GetAnnotationStoreVersionRequestTypeDef
- GetReadSetActivationJobRequestTypeDef
- GetReadSetExportJobRequestTypeDef
- GetReadSetImportJobRequestTypeDef
- GetReadSetMetadataRequestTypeDef
- SequenceInformationTypeDef
- GetReadSetRequestTypeDef
- GetReferenceImportJobRequestTypeDef
- ImportReferenceSourceItemTypeDef
- GetReferenceMetadataRequestTypeDef
- GetReferenceRequestTypeDef
- GetReferenceStoreRequestTypeDef
- GetRunCacheRequestTypeDef
- GetRunGroupRequestTypeDef
- GetRunRequestTypeDef
- RunLogLocationTypeDef
- GetRunTaskRequestTypeDef
- GetS3AccessPolicyRequestTypeDef
- GetSequenceStoreRequestTypeDef
- GetShareRequestTypeDef
- ShareDetailsTypeDef
- GetVariantImportRequestTypeDef
- VariantImportItemDetailTypeDef
- GetVariantStoreRequestTypeDef
- GetWorkflowRequestTypeDef
- ImportReadSetJobItemTypeDef
- SourceFilesTypeDef
- ImportReferenceJobItemTypeDef
- ListAnnotationImportJobsFilterTypeDef
- PaginatorConfigTypeDef
- ListAnnotationStoreVersionsFilterTypeDef
- ListAnnotationStoresFilterTypeDef
- ListMultipartReadSetUploadsRequestTypeDef
- MultipartReadSetUploadListItemTypeDef
- ReadSetUploadPartListItemTypeDef
- ReferenceListItemTypeDef
- ListRunCachesRequestTypeDef
- RunCacheListItemTypeDef
- ListRunGroupsRequestTypeDef
- RunGroupListItemTypeDef
- ListRunTasksRequestTypeDef
- TaskListItemTypeDef
- ListRunsRequestTypeDef
- RunListItemTypeDef
- ListTagsForResourceRequestTypeDef
- ListVariantImportJobsFilterTypeDef
- VariantImportJobItemTypeDef
- ListVariantStoresFilterTypeDef
- ListWorkflowsRequestTypeDef
- WorkflowListItemTypeDef
- PutS3AccessPolicyRequestTypeDef
- ReadOptionsTypeDef
- StartReadSetActivationJobSourceItemTypeDef
- StartReferenceImportJobSourceItemTypeDef
- StartRunRequestTypeDef
- VariantImportItemSourceTypeDef
- TsvStoreOptionsOutputTypeDef
- TsvStoreOptionsTypeDef
- TagResourceRequestTypeDef
- TsvVersionOptionsOutputTypeDef
- TsvVersionOptionsTypeDef
- UntagResourceRequestTypeDef
- UpdateAnnotationStoreRequestTypeDef
- UpdateAnnotationStoreVersionRequestTypeDef
- UpdateRunCacheRequestTypeDef
- UpdateRunGroupRequestTypeDef
- UpdateVariantStoreRequestTypeDef
- UpdateWorkflowRequestTypeDef
- AcceptShareResponseTypeDef
- CompleteMultipartReadSetUploadResponseTypeDef
- CreateMultipartReadSetUploadResponseTypeDef
- CreateRunCacheResponseTypeDef
- CreateRunGroupResponseTypeDef
- CreateShareResponseTypeDef
- CreateWorkflowResponseTypeDef
- DeleteAnnotationStoreResponseTypeDef
- DeleteShareResponseTypeDef
- DeleteVariantStoreResponseTypeDef
- EmptyResponseMetadataTypeDef
- GetReadSetResponseTypeDef
- GetReferenceResponseTypeDef
- GetRunCacheResponseTypeDef
- GetRunGroupResponseTypeDef
- GetRunTaskResponseTypeDef
- GetS3AccessPolicyResponseTypeDef
- ListTagsForResourceResponseTypeDef
- PutS3AccessPolicyResponseTypeDef
- StartAnnotationImportResponseTypeDef
- StartReadSetActivationJobResponseTypeDef
- StartReadSetExportJobResponseTypeDef
- StartReadSetImportJobResponseTypeDef
- StartReferenceImportJobResponseTypeDef
- StartRunResponseTypeDef
- StartVariantImportResponseTypeDef
- UpdateAnnotationStoreVersionResponseTypeDef
- UploadReadSetPartResponseTypeDef
- ActivateReadSetFilterTypeDef
- ExportReadSetFilterTypeDef
- ImportReadSetFilterTypeDef
- ImportReferenceFilterTypeDef
- ReadSetFilterTypeDef
- ReadSetUploadPartListFilterTypeDef
- ReferenceFilterTypeDef
- ReferenceStoreFilterTypeDef
- SequenceStoreFilterTypeDef
- ListReadSetActivationJobsResponseTypeDef
- GetReadSetActivationJobResponseTypeDef
- ListAnnotationImportJobsResponseTypeDef
- CreateVariantStoreResponseTypeDef
- UpdateVariantStoreResponseTypeDef
- AnnotationStoreItemTypeDef
- CreateReferenceStoreRequestTypeDef
- CreateReferenceStoreResponseTypeDef
- CreateVariantStoreRequestTypeDef
- GetReferenceStoreResponseTypeDef
- GetVariantStoreResponseTypeDef
- ReferenceStoreDetailTypeDef
- SequenceStoreDetailTypeDef
- VariantStoreItemTypeDef
- ListAnnotationStoreVersionsResponseTypeDef
- BatchDeleteReadSetResponseTypeDef
- UploadReadSetPartRequestTypeDef
- CompleteMultipartReadSetUploadRequestTypeDef
- CreateSequenceStoreRequestTypeDef
- UpdateSequenceStoreRequestTypeDef
- CreateSequenceStoreResponseTypeDef
- GetSequenceStoreResponseTypeDef
- UpdateSequenceStoreResponseTypeDef
- CreateWorkflowRequestTypeDef
- GetWorkflowResponseTypeDef
- DeleteAnnotationStoreVersionsResponseTypeDef
- GetReadSetExportJobResponseTypeDef
- ListReadSetExportJobsResponseTypeDef
- StartReadSetExportJobRequestTypeDef
- FileInformationTypeDef
- ListSharesRequestTypeDef
- GetAnnotationImportRequestWaitTypeDef
- GetAnnotationStoreRequestWaitExtraTypeDef
- GetAnnotationStoreRequestWaitTypeDef
- GetAnnotationStoreVersionRequestWaitExtraTypeDef
- GetAnnotationStoreVersionRequestWaitTypeDef
- GetReadSetActivationJobRequestWaitTypeDef
- GetReadSetExportJobRequestWaitTypeDef
- GetReadSetImportJobRequestWaitTypeDef
- GetReferenceImportJobRequestWaitTypeDef
- GetRunRequestWaitExtraTypeDef
- GetRunRequestWaitTypeDef
- GetRunTaskRequestWaitExtraTypeDef
- GetRunTaskRequestWaitTypeDef
- GetVariantImportRequestWaitTypeDef
- GetVariantStoreRequestWaitExtraTypeDef
- GetVariantStoreRequestWaitTypeDef
- GetWorkflowRequestWaitTypeDef
- ReadSetListItemTypeDef
- GetReferenceImportJobResponseTypeDef
- GetRunResponseTypeDef
- GetShareResponseTypeDef
- ListSharesResponseTypeDef
- GetVariantImportResponseTypeDef
- ListReadSetImportJobsResponseTypeDef
- ImportReadSetSourceItemTypeDef
- StartReadSetImportJobSourceItemTypeDef
- ListReferenceImportJobsResponseTypeDef
- ListAnnotationImportJobsRequestTypeDef
- ListAnnotationImportJobsRequestPaginateTypeDef
- ListMultipartReadSetUploadsRequestPaginateTypeDef
- ListRunCachesRequestPaginateTypeDef
- ListRunGroupsRequestPaginateTypeDef
- ListRunTasksRequestPaginateTypeDef
- ListRunsRequestPaginateTypeDef
- ListSharesRequestPaginateTypeDef
- ListWorkflowsRequestPaginateTypeDef
- ListAnnotationStoreVersionsRequestPaginateTypeDef
- ListAnnotationStoreVersionsRequestTypeDef
- ListAnnotationStoresRequestPaginateTypeDef
- ListAnnotationStoresRequestTypeDef
- ListMultipartReadSetUploadsResponseTypeDef
- ListReadSetUploadPartsResponseTypeDef
- ListReferencesResponseTypeDef
- ListRunCachesResponseTypeDef
- ListRunGroupsResponseTypeDef
- ListRunTasksResponseTypeDef
- ListRunsResponseTypeDef
- ListVariantImportJobsRequestPaginateTypeDef
- ListVariantImportJobsRequestTypeDef
- ListVariantImportJobsResponseTypeDef
- ListVariantStoresRequestPaginateTypeDef
- ListVariantStoresRequestTypeDef
- ListWorkflowsResponseTypeDef
- TsvOptionsTypeDef
- StartReadSetActivationJobRequestTypeDef
- StartReferenceImportJobRequestTypeDef
- StartVariantImportRequestTypeDef
- StoreOptionsOutputTypeDef
- StoreOptionsTypeDef
- VersionOptionsOutputTypeDef
- VersionOptionsTypeDef
- ListReadSetActivationJobsRequestPaginateTypeDef
- ListReadSetActivationJobsRequestTypeDef
- ListReadSetExportJobsRequestPaginateTypeDef
- ListReadSetExportJobsRequestTypeDef
- ListReadSetImportJobsRequestPaginateTypeDef
- ListReadSetImportJobsRequestTypeDef
- ListReferenceImportJobsRequestPaginateTypeDef
- ListReferenceImportJobsRequestTypeDef
- ListReadSetsRequestPaginateTypeDef
- ListReadSetsRequestTypeDef
- ListReadSetUploadPartsRequestPaginateTypeDef
- ListReadSetUploadPartsRequestTypeDef
- ListReferencesRequestPaginateTypeDef
- ListReferencesRequestTypeDef
- ListReferenceStoresRequestPaginateTypeDef
- ListReferenceStoresRequestTypeDef
- ListSequenceStoresRequestPaginateTypeDef
- ListSequenceStoresRequestTypeDef
- ListAnnotationStoresResponseTypeDef
- ListReferenceStoresResponseTypeDef
- ListSequenceStoresResponseTypeDef
- ListVariantStoresResponseTypeDef
- ReadSetFilesTypeDef
- ReferenceFilesTypeDef
- ListReadSetsResponseTypeDef
- GetReadSetImportJobResponseTypeDef
- StartReadSetImportJobRequestTypeDef
- FormatOptionsTypeDef
- CreateAnnotationStoreResponseTypeDef
- GetAnnotationStoreResponseTypeDef
- UpdateAnnotationStoreResponseTypeDef
- StoreOptionsUnionTypeDef
- CreateAnnotationStoreVersionResponseTypeDef
- GetAnnotationStoreVersionResponseTypeDef
- VersionOptionsUnionTypeDef
- GetReadSetMetadataResponseTypeDef
- GetReferenceMetadataResponseTypeDef
- GetAnnotationImportResponseTypeDef
- StartAnnotationImportRequestTypeDef
- CreateAnnotationStoreRequestTypeDef
- CreateAnnotationStoreVersionRequestTypeDef