Type definitions#
Auto-generated documentation for Omics type annotations stubs module types-boto3-omics.
TimestampTypeDef#
# TimestampTypeDef Union usage example
from types_boto3_omics.type_defs import TimestampTypeDef
def get_value() -> TimestampTypeDef:
return ...
# TimestampTypeDef definition
TimestampTypeDef = Union[
datetime.datetime,
str,
]BlobTypeDef#
# BlobTypeDef Union usage example
from types_boto3_omics.type_defs import BlobTypeDef
def get_value() -> BlobTypeDef:
return ...
# BlobTypeDef definition
BlobTypeDef = Union[
str,
bytes,
IO[Any],
botocore.response.StreamingBody,
]ContainerRegistryMapUnionTypeDef#
# ContainerRegistryMapUnionTypeDef Union usage example
from types_boto3_omics.type_defs import ContainerRegistryMapUnionTypeDef
def get_value() -> ContainerRegistryMapUnionTypeDef:
return ...
# ContainerRegistryMapUnionTypeDef definition
ContainerRegistryMapUnionTypeDef = Union[
ContainerRegistryMapTypeDef, # (1)
ContainerRegistryMapOutputTypeDef, # (2)
]StoreOptionsUnionTypeDef#
# StoreOptionsUnionTypeDef Union usage example
from types_boto3_omics.type_defs import StoreOptionsUnionTypeDef
def get_value() -> StoreOptionsUnionTypeDef:
return ...
# StoreOptionsUnionTypeDef definition
StoreOptionsUnionTypeDef = Union[
StoreOptionsTypeDef, # (1)
StoreOptionsOutputTypeDef, # (2)
]VersionOptionsUnionTypeDef#
# VersionOptionsUnionTypeDef Union usage example
from types_boto3_omics.type_defs import VersionOptionsUnionTypeDef
def get_value() -> VersionOptionsUnionTypeDef:
return ...
# VersionOptionsUnionTypeDef definition
VersionOptionsUnionTypeDef = Union[
VersionOptionsTypeDef, # (1)
VersionOptionsOutputTypeDef, # (2)
]AbortMultipartReadSetUploadRequestTypeDef#
# AbortMultipartReadSetUploadRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import AbortMultipartReadSetUploadRequestTypeDef
def get_value() -> AbortMultipartReadSetUploadRequestTypeDef:
return {
"sequenceStoreId": ...,
}
# AbortMultipartReadSetUploadRequestTypeDef definition
class AbortMultipartReadSetUploadRequestTypeDef(TypedDict):
sequenceStoreId: str,
uploadId: str,AcceptShareRequestTypeDef#
# AcceptShareRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import AcceptShareRequestTypeDef
def get_value() -> AcceptShareRequestTypeDef:
return {
"shareId": ...,
}
# AcceptShareRequestTypeDef definition
class AcceptShareRequestTypeDef(TypedDict):
shareId: str,ResponseMetadataTypeDef#
# ResponseMetadataTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ResponseMetadataTypeDef
def get_value() -> ResponseMetadataTypeDef:
return {
"RequestId": ...,
}
# ResponseMetadataTypeDef definition
class ResponseMetadataTypeDef(TypedDict):
RequestId: str,
HTTPStatusCode: int,
HTTPHeaders: Dict[str, str],
RetryAttempts: int,
HostId: NotRequired[str],ActivateReadSetJobItemTypeDef#
# ActivateReadSetJobItemTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ActivateReadSetJobItemTypeDef
def get_value() -> ActivateReadSetJobItemTypeDef:
return {
"id": ...,
}
# ActivateReadSetJobItemTypeDef definition
class ActivateReadSetJobItemTypeDef(TypedDict):
id: str,
sequenceStoreId: str,
status: ReadSetActivationJobStatusType, # (1)
creationTime: datetime.datetime,
completionTime: NotRequired[datetime.datetime],ActivateReadSetSourceItemTypeDef#
# ActivateReadSetSourceItemTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ActivateReadSetSourceItemTypeDef
def get_value() -> ActivateReadSetSourceItemTypeDef:
return {
"readSetId": ...,
}
# ActivateReadSetSourceItemTypeDef definition
class ActivateReadSetSourceItemTypeDef(TypedDict):
readSetId: str,
status: ReadSetActivationJobItemStatusType, # (1)
statusMessage: NotRequired[str],AnnotationImportItemDetailTypeDef#
# AnnotationImportItemDetailTypeDef TypedDict usage example
from types_boto3_omics.type_defs import AnnotationImportItemDetailTypeDef
def get_value() -> AnnotationImportItemDetailTypeDef:
return {
"source": ...,
}
# AnnotationImportItemDetailTypeDef definition
class AnnotationImportItemDetailTypeDef(TypedDict):
source: str,
jobStatus: JobStatusType, # (1)- See JobStatusType
AnnotationImportItemSourceTypeDef#
# AnnotationImportItemSourceTypeDef TypedDict usage example
from types_boto3_omics.type_defs import AnnotationImportItemSourceTypeDef
def get_value() -> AnnotationImportItemSourceTypeDef:
return {
"source": ...,
}
# AnnotationImportItemSourceTypeDef definition
class AnnotationImportItemSourceTypeDef(TypedDict):
source: str,AnnotationImportJobItemTypeDef#
# AnnotationImportJobItemTypeDef TypedDict usage example
from types_boto3_omics.type_defs import AnnotationImportJobItemTypeDef
def get_value() -> AnnotationImportJobItemTypeDef:
return {
"id": ...,
}
# AnnotationImportJobItemTypeDef definition
class AnnotationImportJobItemTypeDef(TypedDict):
id: str,
destinationName: str,
versionName: str,
roleArn: str,
status: JobStatusType, # (1)
creationTime: datetime.datetime,
updateTime: datetime.datetime,
completionTime: NotRequired[datetime.datetime],
runLeftNormalization: NotRequired[bool],
annotationFields: NotRequired[Dict[str, str]],- See JobStatusType
ReferenceItemTypeDef#
# ReferenceItemTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ReferenceItemTypeDef
def get_value() -> ReferenceItemTypeDef:
return {
"referenceArn": ...,
}
# ReferenceItemTypeDef definition
class ReferenceItemTypeDef(TypedDict):
referenceArn: NotRequired[str],SseConfigTypeDef#
# SseConfigTypeDef TypedDict usage example
from types_boto3_omics.type_defs import SseConfigTypeDef
def get_value() -> SseConfigTypeDef:
return {
"type": ...,
}
# SseConfigTypeDef definition
class SseConfigTypeDef(TypedDict):
type: EncryptionTypeType, # (1)
keyArn: NotRequired[str],AnnotationStoreVersionItemTypeDef#
# AnnotationStoreVersionItemTypeDef TypedDict usage example
from types_boto3_omics.type_defs import AnnotationStoreVersionItemTypeDef
def get_value() -> AnnotationStoreVersionItemTypeDef:
return {
"storeId": ...,
}
# AnnotationStoreVersionItemTypeDef definition
class AnnotationStoreVersionItemTypeDef(TypedDict):
storeId: str,
id: str,
status: VersionStatusType, # (1)
versionArn: str,
name: str,
versionName: str,
description: str,
creationTime: datetime.datetime,
updateTime: datetime.datetime,
statusMessage: str,
versionSizeBytes: int,BatchDeleteReadSetRequestTypeDef#
# BatchDeleteReadSetRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import BatchDeleteReadSetRequestTypeDef
def get_value() -> BatchDeleteReadSetRequestTypeDef:
return {
"ids": ...,
}
# BatchDeleteReadSetRequestTypeDef definition
class BatchDeleteReadSetRequestTypeDef(TypedDict):
ids: Sequence[str],
sequenceStoreId: str,ReadSetBatchErrorTypeDef#
# ReadSetBatchErrorTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ReadSetBatchErrorTypeDef
def get_value() -> ReadSetBatchErrorTypeDef:
return {
"id": ...,
}
# ReadSetBatchErrorTypeDef definition
class ReadSetBatchErrorTypeDef(TypedDict):
id: str,
code: str,
message: str,CancelAnnotationImportRequestTypeDef#
# CancelAnnotationImportRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import CancelAnnotationImportRequestTypeDef
def get_value() -> CancelAnnotationImportRequestTypeDef:
return {
"jobId": ...,
}
# CancelAnnotationImportRequestTypeDef definition
class CancelAnnotationImportRequestTypeDef(TypedDict):
jobId: str,CancelRunRequestTypeDef#
# CancelRunRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import CancelRunRequestTypeDef
def get_value() -> CancelRunRequestTypeDef:
return {
"id": ...,
}
# CancelRunRequestTypeDef definition
class CancelRunRequestTypeDef(TypedDict):
id: str,CancelVariantImportRequestTypeDef#
# CancelVariantImportRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import CancelVariantImportRequestTypeDef
def get_value() -> CancelVariantImportRequestTypeDef:
return {
"jobId": ...,
}
# CancelVariantImportRequestTypeDef definition
class CancelVariantImportRequestTypeDef(TypedDict):
jobId: str,CompleteReadSetUploadPartListItemTypeDef#
# CompleteReadSetUploadPartListItemTypeDef TypedDict usage example
from types_boto3_omics.type_defs import CompleteReadSetUploadPartListItemTypeDef
def get_value() -> CompleteReadSetUploadPartListItemTypeDef:
return {
"partNumber": ...,
}
# CompleteReadSetUploadPartListItemTypeDef definition
class CompleteReadSetUploadPartListItemTypeDef(TypedDict):
partNumber: int,
partSource: ReadSetPartSourceType, # (1)
checksum: str,ImageMappingTypeDef#
# ImageMappingTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ImageMappingTypeDef
def get_value() -> ImageMappingTypeDef:
return {
"sourceImage": ...,
}
# ImageMappingTypeDef definition
class ImageMappingTypeDef(TypedDict):
sourceImage: NotRequired[str],
destinationImage: NotRequired[str],RegistryMappingTypeDef#
# RegistryMappingTypeDef TypedDict usage example
from types_boto3_omics.type_defs import RegistryMappingTypeDef
def get_value() -> RegistryMappingTypeDef:
return {
"upstreamRegistryUrl": ...,
}
# RegistryMappingTypeDef definition
class RegistryMappingTypeDef(TypedDict):
upstreamRegistryUrl: NotRequired[str],
ecrRepositoryPrefix: NotRequired[str],
upstreamRepositoryPrefix: NotRequired[str],
ecrAccountId: NotRequired[str],CreateMultipartReadSetUploadRequestTypeDef#
# CreateMultipartReadSetUploadRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import CreateMultipartReadSetUploadRequestTypeDef
def get_value() -> CreateMultipartReadSetUploadRequestTypeDef:
return {
"sequenceStoreId": ...,
}
# CreateMultipartReadSetUploadRequestTypeDef definition
class CreateMultipartReadSetUploadRequestTypeDef(TypedDict):
sequenceStoreId: str,
sourceFileType: FileTypeType, # (1)
subjectId: str,
sampleId: str,
name: str,
clientToken: NotRequired[str],
generatedFrom: NotRequired[str],
referenceArn: NotRequired[str],
description: NotRequired[str],
tags: NotRequired[Mapping[str, str]],- See FileTypeType
CreateRunCacheRequestTypeDef#
# CreateRunCacheRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import CreateRunCacheRequestTypeDef
def get_value() -> CreateRunCacheRequestTypeDef:
return {
"cacheS3Location": ...,
}
# CreateRunCacheRequestTypeDef definition
class CreateRunCacheRequestTypeDef(TypedDict):
cacheS3Location: str,
requestId: str,
cacheBehavior: NotRequired[CacheBehaviorType], # (1)
description: NotRequired[str],
name: NotRequired[str],
tags: NotRequired[Mapping[str, str]],
cacheBucketOwnerId: NotRequired[str],CreateRunGroupRequestTypeDef#
# CreateRunGroupRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import CreateRunGroupRequestTypeDef
def get_value() -> CreateRunGroupRequestTypeDef:
return {
"requestId": ...,
}
# CreateRunGroupRequestTypeDef definition
class CreateRunGroupRequestTypeDef(TypedDict):
requestId: str,
name: NotRequired[str],
maxCpus: NotRequired[int],
maxRuns: NotRequired[int],
maxDuration: NotRequired[int],
tags: NotRequired[Mapping[str, str]],
maxGpus: NotRequired[int],S3AccessConfigTypeDef#
# S3AccessConfigTypeDef TypedDict usage example
from types_boto3_omics.type_defs import S3AccessConfigTypeDef
def get_value() -> S3AccessConfigTypeDef:
return {
"accessLogLocation": ...,
}
# S3AccessConfigTypeDef definition
class S3AccessConfigTypeDef(TypedDict):
accessLogLocation: NotRequired[str],SequenceStoreS3AccessTypeDef#
# SequenceStoreS3AccessTypeDef TypedDict usage example
from types_boto3_omics.type_defs import SequenceStoreS3AccessTypeDef
def get_value() -> SequenceStoreS3AccessTypeDef:
return {
"s3Uri": ...,
}
# SequenceStoreS3AccessTypeDef definition
class SequenceStoreS3AccessTypeDef(TypedDict):
s3Uri: NotRequired[str],
s3AccessPointArn: NotRequired[str],
accessLogLocation: NotRequired[str],CreateShareRequestTypeDef#
# CreateShareRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import CreateShareRequestTypeDef
def get_value() -> CreateShareRequestTypeDef:
return {
"resourceArn": ...,
}
# CreateShareRequestTypeDef definition
class CreateShareRequestTypeDef(TypedDict):
resourceArn: str,
principalSubscriber: str,
shareName: NotRequired[str],WorkflowParameterTypeDef#
# WorkflowParameterTypeDef TypedDict usage example
from types_boto3_omics.type_defs import WorkflowParameterTypeDef
def get_value() -> WorkflowParameterTypeDef:
return {
"description": ...,
}
# WorkflowParameterTypeDef definition
class WorkflowParameterTypeDef(TypedDict):
description: NotRequired[str],
optional: NotRequired[bool],SourceReferenceTypeDef#
# SourceReferenceTypeDef TypedDict usage example
from types_boto3_omics.type_defs import SourceReferenceTypeDef
def get_value() -> SourceReferenceTypeDef:
return {
"type": ...,
}
# SourceReferenceTypeDef definition
class SourceReferenceTypeDef(TypedDict):
type: SourceReferenceTypeType, # (1)
value: str,DeleteAnnotationStoreRequestTypeDef#
# DeleteAnnotationStoreRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import DeleteAnnotationStoreRequestTypeDef
def get_value() -> DeleteAnnotationStoreRequestTypeDef:
return {
"name": ...,
}
# DeleteAnnotationStoreRequestTypeDef definition
class DeleteAnnotationStoreRequestTypeDef(TypedDict):
name: str,
force: NotRequired[bool],DeleteAnnotationStoreVersionsRequestTypeDef#
# DeleteAnnotationStoreVersionsRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import DeleteAnnotationStoreVersionsRequestTypeDef
def get_value() -> DeleteAnnotationStoreVersionsRequestTypeDef:
return {
"name": ...,
}
# DeleteAnnotationStoreVersionsRequestTypeDef definition
class DeleteAnnotationStoreVersionsRequestTypeDef(TypedDict):
name: str,
versions: Sequence[str],
force: NotRequired[bool],VersionDeleteErrorTypeDef#
# VersionDeleteErrorTypeDef TypedDict usage example
from types_boto3_omics.type_defs import VersionDeleteErrorTypeDef
def get_value() -> VersionDeleteErrorTypeDef:
return {
"versionName": ...,
}
# VersionDeleteErrorTypeDef definition
class VersionDeleteErrorTypeDef(TypedDict):
versionName: str,
message: str,DeleteReferenceRequestTypeDef#
# DeleteReferenceRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import DeleteReferenceRequestTypeDef
def get_value() -> DeleteReferenceRequestTypeDef:
return {
"id": ...,
}
# DeleteReferenceRequestTypeDef definition
class DeleteReferenceRequestTypeDef(TypedDict):
id: str,
referenceStoreId: str,DeleteReferenceStoreRequestTypeDef#
# DeleteReferenceStoreRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import DeleteReferenceStoreRequestTypeDef
def get_value() -> DeleteReferenceStoreRequestTypeDef:
return {
"id": ...,
}
# DeleteReferenceStoreRequestTypeDef definition
class DeleteReferenceStoreRequestTypeDef(TypedDict):
id: str,DeleteRunCacheRequestTypeDef#
# DeleteRunCacheRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import DeleteRunCacheRequestTypeDef
def get_value() -> DeleteRunCacheRequestTypeDef:
return {
"id": ...,
}
# DeleteRunCacheRequestTypeDef definition
class DeleteRunCacheRequestTypeDef(TypedDict):
id: str,DeleteRunGroupRequestTypeDef#
# DeleteRunGroupRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import DeleteRunGroupRequestTypeDef
def get_value() -> DeleteRunGroupRequestTypeDef:
return {
"id": ...,
}
# DeleteRunGroupRequestTypeDef definition
class DeleteRunGroupRequestTypeDef(TypedDict):
id: str,DeleteRunRequestTypeDef#
# DeleteRunRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import DeleteRunRequestTypeDef
def get_value() -> DeleteRunRequestTypeDef:
return {
"id": ...,
}
# DeleteRunRequestTypeDef definition
class DeleteRunRequestTypeDef(TypedDict):
id: str,DeleteS3AccessPolicyRequestTypeDef#
# DeleteS3AccessPolicyRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import DeleteS3AccessPolicyRequestTypeDef
def get_value() -> DeleteS3AccessPolicyRequestTypeDef:
return {
"s3AccessPointArn": ...,
}
# DeleteS3AccessPolicyRequestTypeDef definition
class DeleteS3AccessPolicyRequestTypeDef(TypedDict):
s3AccessPointArn: str,DeleteSequenceStoreRequestTypeDef#
# DeleteSequenceStoreRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import DeleteSequenceStoreRequestTypeDef
def get_value() -> DeleteSequenceStoreRequestTypeDef:
return {
"id": ...,
}
# DeleteSequenceStoreRequestTypeDef definition
class DeleteSequenceStoreRequestTypeDef(TypedDict):
id: str,DeleteShareRequestTypeDef#
# DeleteShareRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import DeleteShareRequestTypeDef
def get_value() -> DeleteShareRequestTypeDef:
return {
"shareId": ...,
}
# DeleteShareRequestTypeDef definition
class DeleteShareRequestTypeDef(TypedDict):
shareId: str,DeleteVariantStoreRequestTypeDef#
# DeleteVariantStoreRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import DeleteVariantStoreRequestTypeDef
def get_value() -> DeleteVariantStoreRequestTypeDef:
return {
"name": ...,
}
# DeleteVariantStoreRequestTypeDef definition
class DeleteVariantStoreRequestTypeDef(TypedDict):
name: str,
force: NotRequired[bool],DeleteWorkflowRequestTypeDef#
# DeleteWorkflowRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import DeleteWorkflowRequestTypeDef
def get_value() -> DeleteWorkflowRequestTypeDef:
return {
"id": ...,
}
# DeleteWorkflowRequestTypeDef definition
class DeleteWorkflowRequestTypeDef(TypedDict):
id: str,DeleteWorkflowVersionRequestTypeDef#
# DeleteWorkflowVersionRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import DeleteWorkflowVersionRequestTypeDef
def get_value() -> DeleteWorkflowVersionRequestTypeDef:
return {
"workflowId": ...,
}
# DeleteWorkflowVersionRequestTypeDef definition
class DeleteWorkflowVersionRequestTypeDef(TypedDict):
workflowId: str,
versionName: str,ETagTypeDef#
# ETagTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ETagTypeDef
def get_value() -> ETagTypeDef:
return {
"algorithm": ...,
}
# ETagTypeDef definition
class ETagTypeDef(TypedDict):
algorithm: NotRequired[ETagAlgorithmType], # (1)
source1: NotRequired[str],
source2: NotRequired[str],ExportReadSetDetailTypeDef#
# ExportReadSetDetailTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ExportReadSetDetailTypeDef
def get_value() -> ExportReadSetDetailTypeDef:
return {
"id": ...,
}
# ExportReadSetDetailTypeDef definition
class ExportReadSetDetailTypeDef(TypedDict):
id: str,
status: ReadSetExportJobItemStatusType, # (1)
statusMessage: NotRequired[str],ExportReadSetJobDetailTypeDef#
# ExportReadSetJobDetailTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ExportReadSetJobDetailTypeDef
def get_value() -> ExportReadSetJobDetailTypeDef:
return {
"id": ...,
}
# ExportReadSetJobDetailTypeDef definition
class ExportReadSetJobDetailTypeDef(TypedDict):
id: str,
sequenceStoreId: str,
destination: str,
status: ReadSetExportJobStatusType, # (1)
creationTime: datetime.datetime,
completionTime: NotRequired[datetime.datetime],ExportReadSetTypeDef#
# ExportReadSetTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ExportReadSetTypeDef
def get_value() -> ExportReadSetTypeDef:
return {
"readSetId": ...,
}
# ExportReadSetTypeDef definition
class ExportReadSetTypeDef(TypedDict):
readSetId: str,ReadSetS3AccessTypeDef#
# ReadSetS3AccessTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ReadSetS3AccessTypeDef
def get_value() -> ReadSetS3AccessTypeDef:
return {
"s3Uri": ...,
}
# ReadSetS3AccessTypeDef definition
class ReadSetS3AccessTypeDef(TypedDict):
s3Uri: NotRequired[str],FilterTypeDef#
# FilterTypeDef TypedDict usage example
from types_boto3_omics.type_defs import FilterTypeDef
def get_value() -> FilterTypeDef:
return {
"resourceArns": ...,
}
# FilterTypeDef definition
class FilterTypeDef(TypedDict):
resourceArns: NotRequired[Sequence[str]],
status: NotRequired[Sequence[ShareStatusType]], # (1)
type: NotRequired[Sequence[ShareResourceTypeType]], # (2)- See
Sequence[ShareStatusType] - See
Sequence[ShareResourceTypeType]
VcfOptionsTypeDef#
# VcfOptionsTypeDef TypedDict usage example
from types_boto3_omics.type_defs import VcfOptionsTypeDef
def get_value() -> VcfOptionsTypeDef:
return {
"ignoreQualField": ...,
}
# VcfOptionsTypeDef definition
class VcfOptionsTypeDef(TypedDict):
ignoreQualField: NotRequired[bool],
ignoreFilterField: NotRequired[bool],GetAnnotationImportRequestTypeDef#
# GetAnnotationImportRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetAnnotationImportRequestTypeDef
def get_value() -> GetAnnotationImportRequestTypeDef:
return {
"jobId": ...,
}
# GetAnnotationImportRequestTypeDef definition
class GetAnnotationImportRequestTypeDef(TypedDict):
jobId: str,WaiterConfigTypeDef#
# WaiterConfigTypeDef TypedDict usage example
from types_boto3_omics.type_defs import WaiterConfigTypeDef
def get_value() -> WaiterConfigTypeDef:
return {
"Delay": ...,
}
# WaiterConfigTypeDef definition
class WaiterConfigTypeDef(TypedDict):
Delay: NotRequired[int],
MaxAttempts: NotRequired[int],GetAnnotationStoreRequestTypeDef#
# GetAnnotationStoreRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetAnnotationStoreRequestTypeDef
def get_value() -> GetAnnotationStoreRequestTypeDef:
return {
"name": ...,
}
# GetAnnotationStoreRequestTypeDef definition
class GetAnnotationStoreRequestTypeDef(TypedDict):
name: str,GetAnnotationStoreVersionRequestTypeDef#
# GetAnnotationStoreVersionRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetAnnotationStoreVersionRequestTypeDef
def get_value() -> GetAnnotationStoreVersionRequestTypeDef:
return {
"name": ...,
}
# GetAnnotationStoreVersionRequestTypeDef definition
class GetAnnotationStoreVersionRequestTypeDef(TypedDict):
name: str,
versionName: str,GetReadSetActivationJobRequestTypeDef#
# GetReadSetActivationJobRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetReadSetActivationJobRequestTypeDef
def get_value() -> GetReadSetActivationJobRequestTypeDef:
return {
"id": ...,
}
# GetReadSetActivationJobRequestTypeDef definition
class GetReadSetActivationJobRequestTypeDef(TypedDict):
id: str,
sequenceStoreId: str,GetReadSetExportJobRequestTypeDef#
# GetReadSetExportJobRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetReadSetExportJobRequestTypeDef
def get_value() -> GetReadSetExportJobRequestTypeDef:
return {
"sequenceStoreId": ...,
}
# GetReadSetExportJobRequestTypeDef definition
class GetReadSetExportJobRequestTypeDef(TypedDict):
sequenceStoreId: str,
id: str,GetReadSetImportJobRequestTypeDef#
# GetReadSetImportJobRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetReadSetImportJobRequestTypeDef
def get_value() -> GetReadSetImportJobRequestTypeDef:
return {
"id": ...,
}
# GetReadSetImportJobRequestTypeDef definition
class GetReadSetImportJobRequestTypeDef(TypedDict):
id: str,
sequenceStoreId: str,GetReadSetMetadataRequestTypeDef#
# GetReadSetMetadataRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetReadSetMetadataRequestTypeDef
def get_value() -> GetReadSetMetadataRequestTypeDef:
return {
"id": ...,
}
# GetReadSetMetadataRequestTypeDef definition
class GetReadSetMetadataRequestTypeDef(TypedDict):
id: str,
sequenceStoreId: str,SequenceInformationTypeDef#
# SequenceInformationTypeDef TypedDict usage example
from types_boto3_omics.type_defs import SequenceInformationTypeDef
def get_value() -> SequenceInformationTypeDef:
return {
"totalReadCount": ...,
}
# SequenceInformationTypeDef definition
class SequenceInformationTypeDef(TypedDict):
totalReadCount: NotRequired[int],
totalBaseCount: NotRequired[int],
generatedFrom: NotRequired[str],
alignment: NotRequired[str],GetReadSetRequestTypeDef#
# GetReadSetRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetReadSetRequestTypeDef
def get_value() -> GetReadSetRequestTypeDef:
return {
"id": ...,
}
# GetReadSetRequestTypeDef definition
class GetReadSetRequestTypeDef(TypedDict):
id: str,
sequenceStoreId: str,
partNumber: int,
file: NotRequired[ReadSetFileType], # (1)- See ReadSetFileType
GetReferenceImportJobRequestTypeDef#
# GetReferenceImportJobRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetReferenceImportJobRequestTypeDef
def get_value() -> GetReferenceImportJobRequestTypeDef:
return {
"id": ...,
}
# GetReferenceImportJobRequestTypeDef definition
class GetReferenceImportJobRequestTypeDef(TypedDict):
id: str,
referenceStoreId: str,ImportReferenceSourceItemTypeDef#
# ImportReferenceSourceItemTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ImportReferenceSourceItemTypeDef
def get_value() -> ImportReferenceSourceItemTypeDef:
return {
"sourceFile": ...,
}
# ImportReferenceSourceItemTypeDef definition
class ImportReferenceSourceItemTypeDef(TypedDict):
status: ReferenceImportJobItemStatusType, # (1)
sourceFile: NotRequired[str],
statusMessage: NotRequired[str],
name: NotRequired[str],
description: NotRequired[str],
tags: NotRequired[Dict[str, str]],
referenceId: NotRequired[str],GetReferenceMetadataRequestTypeDef#
# GetReferenceMetadataRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetReferenceMetadataRequestTypeDef
def get_value() -> GetReferenceMetadataRequestTypeDef:
return {
"id": ...,
}
# GetReferenceMetadataRequestTypeDef definition
class GetReferenceMetadataRequestTypeDef(TypedDict):
id: str,
referenceStoreId: str,GetReferenceRequestTypeDef#
# GetReferenceRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetReferenceRequestTypeDef
def get_value() -> GetReferenceRequestTypeDef:
return {
"id": ...,
}
# GetReferenceRequestTypeDef definition
class GetReferenceRequestTypeDef(TypedDict):
id: str,
referenceStoreId: str,
partNumber: int,
range: NotRequired[str],
file: NotRequired[ReferenceFileType], # (1)GetReferenceStoreRequestTypeDef#
# GetReferenceStoreRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetReferenceStoreRequestTypeDef
def get_value() -> GetReferenceStoreRequestTypeDef:
return {
"id": ...,
}
# GetReferenceStoreRequestTypeDef definition
class GetReferenceStoreRequestTypeDef(TypedDict):
id: str,GetRunCacheRequestTypeDef#
# GetRunCacheRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetRunCacheRequestTypeDef
def get_value() -> GetRunCacheRequestTypeDef:
return {
"id": ...,
}
# GetRunCacheRequestTypeDef definition
class GetRunCacheRequestTypeDef(TypedDict):
id: str,GetRunGroupRequestTypeDef#
# GetRunGroupRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetRunGroupRequestTypeDef
def get_value() -> GetRunGroupRequestTypeDef:
return {
"id": ...,
}
# GetRunGroupRequestTypeDef definition
class GetRunGroupRequestTypeDef(TypedDict):
id: str,GetRunRequestTypeDef#
# GetRunRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetRunRequestTypeDef
def get_value() -> GetRunRequestTypeDef:
return {
"id": ...,
}
# GetRunRequestTypeDef definition
class GetRunRequestTypeDef(TypedDict):
id: str,
export: NotRequired[Sequence[RunExportType]], # (1)- See
Sequence[Literal['DEFINITION']]
RunLogLocationTypeDef#
# RunLogLocationTypeDef TypedDict usage example
from types_boto3_omics.type_defs import RunLogLocationTypeDef
def get_value() -> RunLogLocationTypeDef:
return {
"engineLogStream": ...,
}
# RunLogLocationTypeDef definition
class RunLogLocationTypeDef(TypedDict):
engineLogStream: NotRequired[str],
runLogStream: NotRequired[str],GetRunTaskRequestTypeDef#
# GetRunTaskRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetRunTaskRequestTypeDef
def get_value() -> GetRunTaskRequestTypeDef:
return {
"id": ...,
}
# GetRunTaskRequestTypeDef definition
class GetRunTaskRequestTypeDef(TypedDict):
id: str,
taskId: str,ImageDetailsTypeDef#
# ImageDetailsTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ImageDetailsTypeDef
def get_value() -> ImageDetailsTypeDef:
return {
"image": ...,
}
# ImageDetailsTypeDef definition
class ImageDetailsTypeDef(TypedDict):
image: NotRequired[str],
imageDigest: NotRequired[str],
sourceImage: NotRequired[str],GetS3AccessPolicyRequestTypeDef#
# GetS3AccessPolicyRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetS3AccessPolicyRequestTypeDef
def get_value() -> GetS3AccessPolicyRequestTypeDef:
return {
"s3AccessPointArn": ...,
}
# GetS3AccessPolicyRequestTypeDef definition
class GetS3AccessPolicyRequestTypeDef(TypedDict):
s3AccessPointArn: str,GetSequenceStoreRequestTypeDef#
# GetSequenceStoreRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetSequenceStoreRequestTypeDef
def get_value() -> GetSequenceStoreRequestTypeDef:
return {
"id": ...,
}
# GetSequenceStoreRequestTypeDef definition
class GetSequenceStoreRequestTypeDef(TypedDict):
id: str,GetShareRequestTypeDef#
# GetShareRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetShareRequestTypeDef
def get_value() -> GetShareRequestTypeDef:
return {
"shareId": ...,
}
# GetShareRequestTypeDef definition
class GetShareRequestTypeDef(TypedDict):
shareId: str,ShareDetailsTypeDef#
# ShareDetailsTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ShareDetailsTypeDef
def get_value() -> ShareDetailsTypeDef:
return {
"shareId": ...,
}
# ShareDetailsTypeDef definition
class ShareDetailsTypeDef(TypedDict):
shareId: NotRequired[str],
resourceArn: NotRequired[str],
resourceId: NotRequired[str],
principalSubscriber: NotRequired[str],
ownerId: NotRequired[str],
status: NotRequired[ShareStatusType], # (1)
statusMessage: NotRequired[str],
shareName: NotRequired[str],
creationTime: NotRequired[datetime.datetime],
updateTime: NotRequired[datetime.datetime],- See ShareStatusType
GetVariantImportRequestTypeDef#
# GetVariantImportRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetVariantImportRequestTypeDef
def get_value() -> GetVariantImportRequestTypeDef:
return {
"jobId": ...,
}
# GetVariantImportRequestTypeDef definition
class GetVariantImportRequestTypeDef(TypedDict):
jobId: str,VariantImportItemDetailTypeDef#
# VariantImportItemDetailTypeDef TypedDict usage example
from types_boto3_omics.type_defs import VariantImportItemDetailTypeDef
def get_value() -> VariantImportItemDetailTypeDef:
return {
"source": ...,
}
# VariantImportItemDetailTypeDef definition
class VariantImportItemDetailTypeDef(TypedDict):
source: str,
jobStatus: JobStatusType, # (1)
statusMessage: NotRequired[str],- See JobStatusType
GetVariantStoreRequestTypeDef#
# GetVariantStoreRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetVariantStoreRequestTypeDef
def get_value() -> GetVariantStoreRequestTypeDef:
return {
"name": ...,
}
# GetVariantStoreRequestTypeDef definition
class GetVariantStoreRequestTypeDef(TypedDict):
name: str,GetWorkflowRequestTypeDef#
# GetWorkflowRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetWorkflowRequestTypeDef
def get_value() -> GetWorkflowRequestTypeDef:
return {
"id": ...,
}
# GetWorkflowRequestTypeDef definition
class GetWorkflowRequestTypeDef(TypedDict):
id: str,
type: NotRequired[WorkflowTypeType], # (1)
export: NotRequired[Sequence[WorkflowExportType]], # (2)
workflowOwnerId: NotRequired[str],- See WorkflowTypeType
- See
Sequence[WorkflowExportType]
GetWorkflowVersionRequestTypeDef#
# GetWorkflowVersionRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetWorkflowVersionRequestTypeDef
def get_value() -> GetWorkflowVersionRequestTypeDef:
return {
"workflowId": ...,
}
# GetWorkflowVersionRequestTypeDef definition
class GetWorkflowVersionRequestTypeDef(TypedDict):
workflowId: str,
versionName: str,
type: NotRequired[WorkflowTypeType], # (1)
export: NotRequired[Sequence[WorkflowExportType]], # (2)
workflowOwnerId: NotRequired[str],- See WorkflowTypeType
- See
Sequence[WorkflowExportType]
ImportReadSetJobItemTypeDef#
# ImportReadSetJobItemTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ImportReadSetJobItemTypeDef
def get_value() -> ImportReadSetJobItemTypeDef:
return {
"id": ...,
}
# ImportReadSetJobItemTypeDef definition
class ImportReadSetJobItemTypeDef(TypedDict):
id: str,
sequenceStoreId: str,
roleArn: str,
status: ReadSetImportJobStatusType, # (1)
creationTime: datetime.datetime,
completionTime: NotRequired[datetime.datetime],SourceFilesTypeDef#
# SourceFilesTypeDef TypedDict usage example
from types_boto3_omics.type_defs import SourceFilesTypeDef
def get_value() -> SourceFilesTypeDef:
return {
"source1": ...,
}
# SourceFilesTypeDef definition
class SourceFilesTypeDef(TypedDict):
source1: str,
source2: NotRequired[str],ImportReferenceJobItemTypeDef#
# ImportReferenceJobItemTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ImportReferenceJobItemTypeDef
def get_value() -> ImportReferenceJobItemTypeDef:
return {
"id": ...,
}
# ImportReferenceJobItemTypeDef definition
class ImportReferenceJobItemTypeDef(TypedDict):
id: str,
referenceStoreId: str,
roleArn: str,
status: ReferenceImportJobStatusType, # (1)
creationTime: datetime.datetime,
completionTime: NotRequired[datetime.datetime],ListAnnotationImportJobsFilterTypeDef#
# ListAnnotationImportJobsFilterTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListAnnotationImportJobsFilterTypeDef
def get_value() -> ListAnnotationImportJobsFilterTypeDef:
return {
"status": ...,
}
# ListAnnotationImportJobsFilterTypeDef definition
class ListAnnotationImportJobsFilterTypeDef(TypedDict):
status: NotRequired[JobStatusType], # (1)
storeName: NotRequired[str],- See JobStatusType
PaginatorConfigTypeDef#
# PaginatorConfigTypeDef TypedDict usage example
from types_boto3_omics.type_defs import PaginatorConfigTypeDef
def get_value() -> PaginatorConfigTypeDef:
return {
"MaxItems": ...,
}
# PaginatorConfigTypeDef definition
class PaginatorConfigTypeDef(TypedDict):
MaxItems: NotRequired[int],
PageSize: NotRequired[int],
StartingToken: NotRequired[str],ListAnnotationStoreVersionsFilterTypeDef#
# ListAnnotationStoreVersionsFilterTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListAnnotationStoreVersionsFilterTypeDef
def get_value() -> ListAnnotationStoreVersionsFilterTypeDef:
return {
"status": ...,
}
# ListAnnotationStoreVersionsFilterTypeDef definition
class ListAnnotationStoreVersionsFilterTypeDef(TypedDict):
status: NotRequired[VersionStatusType], # (1)ListAnnotationStoresFilterTypeDef#
# ListAnnotationStoresFilterTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListAnnotationStoresFilterTypeDef
def get_value() -> ListAnnotationStoresFilterTypeDef:
return {
"status": ...,
}
# ListAnnotationStoresFilterTypeDef definition
class ListAnnotationStoresFilterTypeDef(TypedDict):
status: NotRequired[StoreStatusType], # (1)- See StoreStatusType
ListMultipartReadSetUploadsRequestTypeDef#
# ListMultipartReadSetUploadsRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListMultipartReadSetUploadsRequestTypeDef
def get_value() -> ListMultipartReadSetUploadsRequestTypeDef:
return {
"sequenceStoreId": ...,
}
# ListMultipartReadSetUploadsRequestTypeDef definition
class ListMultipartReadSetUploadsRequestTypeDef(TypedDict):
sequenceStoreId: str,
maxResults: NotRequired[int],
nextToken: NotRequired[str],MultipartReadSetUploadListItemTypeDef#
# MultipartReadSetUploadListItemTypeDef TypedDict usage example
from types_boto3_omics.type_defs import MultipartReadSetUploadListItemTypeDef
def get_value() -> MultipartReadSetUploadListItemTypeDef:
return {
"sequenceStoreId": ...,
}
# MultipartReadSetUploadListItemTypeDef definition
class MultipartReadSetUploadListItemTypeDef(TypedDict):
sequenceStoreId: str,
uploadId: str,
sourceFileType: FileTypeType, # (1)
subjectId: str,
sampleId: str,
generatedFrom: str,
referenceArn: str,
creationTime: datetime.datetime,
name: NotRequired[str],
description: NotRequired[str],
tags: NotRequired[Dict[str, str]],- See FileTypeType
ReadSetUploadPartListItemTypeDef#
# ReadSetUploadPartListItemTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ReadSetUploadPartListItemTypeDef
def get_value() -> ReadSetUploadPartListItemTypeDef:
return {
"partNumber": ...,
}
# ReadSetUploadPartListItemTypeDef definition
class ReadSetUploadPartListItemTypeDef(TypedDict):
partNumber: int,
partSize: int,
partSource: ReadSetPartSourceType, # (1)
checksum: str,
creationTime: NotRequired[datetime.datetime],
lastUpdatedTime: NotRequired[datetime.datetime],ReferenceListItemTypeDef#
# ReferenceListItemTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ReferenceListItemTypeDef
def get_value() -> ReferenceListItemTypeDef:
return {
"id": ...,
}
# ReferenceListItemTypeDef definition
class ReferenceListItemTypeDef(TypedDict):
id: str,
arn: str,
referenceStoreId: str,
md5: str,
creationTime: datetime.datetime,
updateTime: datetime.datetime,
status: NotRequired[ReferenceStatusType], # (1)
name: NotRequired[str],
description: NotRequired[str],ListRunCachesRequestTypeDef#
# ListRunCachesRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListRunCachesRequestTypeDef
def get_value() -> ListRunCachesRequestTypeDef:
return {
"maxResults": ...,
}
# ListRunCachesRequestTypeDef definition
class ListRunCachesRequestTypeDef(TypedDict):
maxResults: NotRequired[int],
startingToken: NotRequired[str],RunCacheListItemTypeDef#
# RunCacheListItemTypeDef TypedDict usage example
from types_boto3_omics.type_defs import RunCacheListItemTypeDef
def get_value() -> RunCacheListItemTypeDef:
return {
"arn": ...,
}
# RunCacheListItemTypeDef definition
class RunCacheListItemTypeDef(TypedDict):
arn: NotRequired[str],
cacheBehavior: NotRequired[CacheBehaviorType], # (1)
cacheS3Uri: NotRequired[str],
creationTime: NotRequired[datetime.datetime],
id: NotRequired[str],
name: NotRequired[str],
status: NotRequired[RunCacheStatusType], # (2)- See CacheBehaviorType
- See RunCacheStatusType
ListRunGroupsRequestTypeDef#
# ListRunGroupsRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListRunGroupsRequestTypeDef
def get_value() -> ListRunGroupsRequestTypeDef:
return {
"name": ...,
}
# ListRunGroupsRequestTypeDef definition
class ListRunGroupsRequestTypeDef(TypedDict):
name: NotRequired[str],
startingToken: NotRequired[str],
maxResults: NotRequired[int],RunGroupListItemTypeDef#
# RunGroupListItemTypeDef TypedDict usage example
from types_boto3_omics.type_defs import RunGroupListItemTypeDef
def get_value() -> RunGroupListItemTypeDef:
return {
"arn": ...,
}
# RunGroupListItemTypeDef definition
class RunGroupListItemTypeDef(TypedDict):
arn: NotRequired[str],
id: NotRequired[str],
name: NotRequired[str],
maxCpus: NotRequired[int],
maxRuns: NotRequired[int],
maxDuration: NotRequired[int],
creationTime: NotRequired[datetime.datetime],
maxGpus: NotRequired[int],ListRunTasksRequestTypeDef#
# ListRunTasksRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListRunTasksRequestTypeDef
def get_value() -> ListRunTasksRequestTypeDef:
return {
"id": ...,
}
# ListRunTasksRequestTypeDef definition
class ListRunTasksRequestTypeDef(TypedDict):
id: str,
status: NotRequired[TaskStatusType], # (1)
startingToken: NotRequired[str],
maxResults: NotRequired[int],- See TaskStatusType
TaskListItemTypeDef#
# TaskListItemTypeDef TypedDict usage example
from types_boto3_omics.type_defs import TaskListItemTypeDef
def get_value() -> TaskListItemTypeDef:
return {
"taskId": ...,
}
# TaskListItemTypeDef definition
class TaskListItemTypeDef(TypedDict):
taskId: NotRequired[str],
status: NotRequired[TaskStatusType], # (1)
name: NotRequired[str],
cpus: NotRequired[int],
cacheHit: NotRequired[bool],
cacheS3Uri: NotRequired[str],
memory: NotRequired[int],
creationTime: NotRequired[datetime.datetime],
startTime: NotRequired[datetime.datetime],
stopTime: NotRequired[datetime.datetime],
gpus: NotRequired[int],
instanceType: NotRequired[str],- See TaskStatusType
ListRunsRequestTypeDef#
# ListRunsRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListRunsRequestTypeDef
def get_value() -> ListRunsRequestTypeDef:
return {
"name": ...,
}
# ListRunsRequestTypeDef definition
class ListRunsRequestTypeDef(TypedDict):
name: NotRequired[str],
runGroupId: NotRequired[str],
startingToken: NotRequired[str],
maxResults: NotRequired[int],
status: NotRequired[RunStatusType], # (1)- See RunStatusType
RunListItemTypeDef#
# RunListItemTypeDef TypedDict usage example
from types_boto3_omics.type_defs import RunListItemTypeDef
def get_value() -> RunListItemTypeDef:
return {
"arn": ...,
}
# RunListItemTypeDef definition
class RunListItemTypeDef(TypedDict):
arn: NotRequired[str],
id: NotRequired[str],
status: NotRequired[RunStatusType], # (1)
workflowId: NotRequired[str],
name: NotRequired[str],
priority: NotRequired[int],
storageCapacity: NotRequired[int],
creationTime: NotRequired[datetime.datetime],
startTime: NotRequired[datetime.datetime],
stopTime: NotRequired[datetime.datetime],
storageType: NotRequired[StorageTypeType], # (2)
workflowVersionName: NotRequired[str],- See RunStatusType
- See StorageTypeType
ListTagsForResourceRequestTypeDef#
# ListTagsForResourceRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListTagsForResourceRequestTypeDef
def get_value() -> ListTagsForResourceRequestTypeDef:
return {
"resourceArn": ...,
}
# ListTagsForResourceRequestTypeDef definition
class ListTagsForResourceRequestTypeDef(TypedDict):
resourceArn: str,ListVariantImportJobsFilterTypeDef#
# ListVariantImportJobsFilterTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListVariantImportJobsFilterTypeDef
def get_value() -> ListVariantImportJobsFilterTypeDef:
return {
"status": ...,
}
# ListVariantImportJobsFilterTypeDef definition
class ListVariantImportJobsFilterTypeDef(TypedDict):
status: NotRequired[JobStatusType], # (1)
storeName: NotRequired[str],- See JobStatusType
VariantImportJobItemTypeDef#
# VariantImportJobItemTypeDef TypedDict usage example
from types_boto3_omics.type_defs import VariantImportJobItemTypeDef
def get_value() -> VariantImportJobItemTypeDef:
return {
"id": ...,
}
# VariantImportJobItemTypeDef definition
class VariantImportJobItemTypeDef(TypedDict):
id: str,
destinationName: str,
roleArn: str,
status: JobStatusType, # (1)
creationTime: datetime.datetime,
updateTime: datetime.datetime,
completionTime: NotRequired[datetime.datetime],
runLeftNormalization: NotRequired[bool],
annotationFields: NotRequired[Dict[str, str]],- See JobStatusType
ListVariantStoresFilterTypeDef#
# ListVariantStoresFilterTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListVariantStoresFilterTypeDef
def get_value() -> ListVariantStoresFilterTypeDef:
return {
"status": ...,
}
# ListVariantStoresFilterTypeDef definition
class ListVariantStoresFilterTypeDef(TypedDict):
status: NotRequired[StoreStatusType], # (1)- See StoreStatusType
ListWorkflowVersionsRequestTypeDef#
# ListWorkflowVersionsRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListWorkflowVersionsRequestTypeDef
def get_value() -> ListWorkflowVersionsRequestTypeDef:
return {
"workflowId": ...,
}
# ListWorkflowVersionsRequestTypeDef definition
class ListWorkflowVersionsRequestTypeDef(TypedDict):
workflowId: str,
type: NotRequired[WorkflowTypeType], # (1)
workflowOwnerId: NotRequired[str],
startingToken: NotRequired[str],
maxResults: NotRequired[int],- See WorkflowTypeType
WorkflowVersionListItemTypeDef#
# WorkflowVersionListItemTypeDef TypedDict usage example
from types_boto3_omics.type_defs import WorkflowVersionListItemTypeDef
def get_value() -> WorkflowVersionListItemTypeDef:
return {
"arn": ...,
}
# WorkflowVersionListItemTypeDef definition
class WorkflowVersionListItemTypeDef(TypedDict):
arn: NotRequired[str],
workflowId: NotRequired[str],
versionName: NotRequired[str],
description: NotRequired[str],
status: NotRequired[WorkflowStatusType], # (1)
type: NotRequired[WorkflowTypeType], # (2)
digest: NotRequired[str],
creationTime: NotRequired[datetime.datetime],
metadata: NotRequired[Dict[str, str]],- See WorkflowStatusType
- See WorkflowTypeType
ListWorkflowsRequestTypeDef#
# ListWorkflowsRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListWorkflowsRequestTypeDef
def get_value() -> ListWorkflowsRequestTypeDef:
return {
"type": ...,
}
# ListWorkflowsRequestTypeDef definition
class ListWorkflowsRequestTypeDef(TypedDict):
type: NotRequired[WorkflowTypeType], # (1)
name: NotRequired[str],
startingToken: NotRequired[str],
maxResults: NotRequired[int],- See WorkflowTypeType
WorkflowListItemTypeDef#
# WorkflowListItemTypeDef TypedDict usage example
from types_boto3_omics.type_defs import WorkflowListItemTypeDef
def get_value() -> WorkflowListItemTypeDef:
return {
"arn": ...,
}
# WorkflowListItemTypeDef definition
class WorkflowListItemTypeDef(TypedDict):
arn: NotRequired[str],
id: NotRequired[str],
name: NotRequired[str],
status: NotRequired[WorkflowStatusType], # (1)
type: NotRequired[WorkflowTypeType], # (2)
digest: NotRequired[str],
creationTime: NotRequired[datetime.datetime],
metadata: NotRequired[Dict[str, str]],- See WorkflowStatusType
- See WorkflowTypeType
PutS3AccessPolicyRequestTypeDef#
# PutS3AccessPolicyRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import PutS3AccessPolicyRequestTypeDef
def get_value() -> PutS3AccessPolicyRequestTypeDef:
return {
"s3AccessPointArn": ...,
}
# PutS3AccessPolicyRequestTypeDef definition
class PutS3AccessPolicyRequestTypeDef(TypedDict):
s3AccessPointArn: str,
s3AccessPolicy: str,ReadOptionsTypeDef#
# ReadOptionsTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ReadOptionsTypeDef
def get_value() -> ReadOptionsTypeDef:
return {
"sep": ...,
}
# ReadOptionsTypeDef definition
class ReadOptionsTypeDef(TypedDict):
sep: NotRequired[str],
encoding: NotRequired[str],
quote: NotRequired[str],
quoteAll: NotRequired[bool],
escape: NotRequired[str],
escapeQuotes: NotRequired[bool],
comment: NotRequired[str],
header: NotRequired[bool],
lineSep: NotRequired[str],StartReadSetActivationJobSourceItemTypeDef#
# StartReadSetActivationJobSourceItemTypeDef TypedDict usage example
from types_boto3_omics.type_defs import StartReadSetActivationJobSourceItemTypeDef
def get_value() -> StartReadSetActivationJobSourceItemTypeDef:
return {
"readSetId": ...,
}
# StartReadSetActivationJobSourceItemTypeDef definition
class StartReadSetActivationJobSourceItemTypeDef(TypedDict):
readSetId: str,StartReferenceImportJobSourceItemTypeDef#
# StartReferenceImportJobSourceItemTypeDef TypedDict usage example
from types_boto3_omics.type_defs import StartReferenceImportJobSourceItemTypeDef
def get_value() -> StartReferenceImportJobSourceItemTypeDef:
return {
"sourceFile": ...,
}
# StartReferenceImportJobSourceItemTypeDef definition
class StartReferenceImportJobSourceItemTypeDef(TypedDict):
sourceFile: str,
name: str,
description: NotRequired[str],
tags: NotRequired[Mapping[str, str]],StartRunRequestTypeDef#
# StartRunRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import StartRunRequestTypeDef
def get_value() -> StartRunRequestTypeDef:
return {
"roleArn": ...,
}
# StartRunRequestTypeDef definition
class StartRunRequestTypeDef(TypedDict):
roleArn: str,
outputUri: str,
requestId: str,
workflowId: NotRequired[str],
workflowType: NotRequired[WorkflowTypeType], # (1)
runId: NotRequired[str],
name: NotRequired[str],
cacheId: NotRequired[str],
cacheBehavior: NotRequired[CacheBehaviorType], # (2)
runGroupId: NotRequired[str],
priority: NotRequired[int],
parameters: NotRequired[Mapping[str, Any]],
storageCapacity: NotRequired[int],
logLevel: NotRequired[RunLogLevelType], # (3)
tags: NotRequired[Mapping[str, str]],
retentionMode: NotRequired[RunRetentionModeType], # (4)
storageType: NotRequired[StorageTypeType], # (5)
workflowOwnerId: NotRequired[str],
workflowVersionName: NotRequired[str],- See WorkflowTypeType
- See CacheBehaviorType
- See RunLogLevelType
- See RunRetentionModeType
- See StorageTypeType
VariantImportItemSourceTypeDef#
# VariantImportItemSourceTypeDef TypedDict usage example
from types_boto3_omics.type_defs import VariantImportItemSourceTypeDef
def get_value() -> VariantImportItemSourceTypeDef:
return {
"source": ...,
}
# VariantImportItemSourceTypeDef definition
class VariantImportItemSourceTypeDef(TypedDict):
source: str,TsvStoreOptionsOutputTypeDef#
# TsvStoreOptionsOutputTypeDef TypedDict usage example
from types_boto3_omics.type_defs import TsvStoreOptionsOutputTypeDef
def get_value() -> TsvStoreOptionsOutputTypeDef:
return {
"annotationType": ...,
}
# TsvStoreOptionsOutputTypeDef definition
class TsvStoreOptionsOutputTypeDef(TypedDict):
annotationType: NotRequired[AnnotationTypeType], # (1)
formatToHeader: NotRequired[Dict[FormatToHeaderKeyType, str]], # (2)
schema: NotRequired[List[Dict[str, SchemaValueTypeType]]], # (3)- See AnnotationTypeType
- See
Dict[FormatToHeaderKeyType, str] - See
List[Dict[str, SchemaValueTypeType]]
TsvStoreOptionsTypeDef#
# TsvStoreOptionsTypeDef TypedDict usage example
from types_boto3_omics.type_defs import TsvStoreOptionsTypeDef
def get_value() -> TsvStoreOptionsTypeDef:
return {
"annotationType": ...,
}
# TsvStoreOptionsTypeDef definition
class TsvStoreOptionsTypeDef(TypedDict):
annotationType: NotRequired[AnnotationTypeType], # (1)
formatToHeader: NotRequired[Mapping[FormatToHeaderKeyType, str]], # (2)
schema: NotRequired[Sequence[Mapping[str, SchemaValueTypeType]]], # (3)- See AnnotationTypeType
- See
Mapping[FormatToHeaderKeyType, str] - See
Sequence[Mapping[str, SchemaValueTypeType]]
TagResourceRequestTypeDef#
# TagResourceRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import TagResourceRequestTypeDef
def get_value() -> TagResourceRequestTypeDef:
return {
"resourceArn": ...,
}
# TagResourceRequestTypeDef definition
class TagResourceRequestTypeDef(TypedDict):
resourceArn: str,
tags: Mapping[str, str],TsvVersionOptionsOutputTypeDef#
# TsvVersionOptionsOutputTypeDef TypedDict usage example
from types_boto3_omics.type_defs import TsvVersionOptionsOutputTypeDef
def get_value() -> TsvVersionOptionsOutputTypeDef:
return {
"annotationType": ...,
}
# TsvVersionOptionsOutputTypeDef definition
class TsvVersionOptionsOutputTypeDef(TypedDict):
annotationType: NotRequired[AnnotationTypeType], # (1)
formatToHeader: NotRequired[Dict[FormatToHeaderKeyType, str]], # (2)
schema: NotRequired[List[Dict[str, SchemaValueTypeType]]], # (3)- See AnnotationTypeType
- See
Dict[FormatToHeaderKeyType, str] - See
List[Dict[str, SchemaValueTypeType]]
TsvVersionOptionsTypeDef#
# TsvVersionOptionsTypeDef TypedDict usage example
from types_boto3_omics.type_defs import TsvVersionOptionsTypeDef
def get_value() -> TsvVersionOptionsTypeDef:
return {
"annotationType": ...,
}
# TsvVersionOptionsTypeDef definition
class TsvVersionOptionsTypeDef(TypedDict):
annotationType: NotRequired[AnnotationTypeType], # (1)
formatToHeader: NotRequired[Mapping[FormatToHeaderKeyType, str]], # (2)
schema: NotRequired[Sequence[Mapping[str, SchemaValueTypeType]]], # (3)- See AnnotationTypeType
- See
Mapping[FormatToHeaderKeyType, str] - See
Sequence[Mapping[str, SchemaValueTypeType]]
UntagResourceRequestTypeDef#
# UntagResourceRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import UntagResourceRequestTypeDef
def get_value() -> UntagResourceRequestTypeDef:
return {
"resourceArn": ...,
}
# UntagResourceRequestTypeDef definition
class UntagResourceRequestTypeDef(TypedDict):
resourceArn: str,
tagKeys: Sequence[str],UpdateAnnotationStoreRequestTypeDef#
# UpdateAnnotationStoreRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import UpdateAnnotationStoreRequestTypeDef
def get_value() -> UpdateAnnotationStoreRequestTypeDef:
return {
"name": ...,
}
# UpdateAnnotationStoreRequestTypeDef definition
class UpdateAnnotationStoreRequestTypeDef(TypedDict):
name: str,
description: NotRequired[str],UpdateAnnotationStoreVersionRequestTypeDef#
# UpdateAnnotationStoreVersionRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import UpdateAnnotationStoreVersionRequestTypeDef
def get_value() -> UpdateAnnotationStoreVersionRequestTypeDef:
return {
"name": ...,
}
# UpdateAnnotationStoreVersionRequestTypeDef definition
class UpdateAnnotationStoreVersionRequestTypeDef(TypedDict):
name: str,
versionName: str,
description: NotRequired[str],UpdateRunCacheRequestTypeDef#
# UpdateRunCacheRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import UpdateRunCacheRequestTypeDef
def get_value() -> UpdateRunCacheRequestTypeDef:
return {
"id": ...,
}
# UpdateRunCacheRequestTypeDef definition
class UpdateRunCacheRequestTypeDef(TypedDict):
id: str,
cacheBehavior: NotRequired[CacheBehaviorType], # (1)
description: NotRequired[str],
name: NotRequired[str],UpdateRunGroupRequestTypeDef#
# UpdateRunGroupRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import UpdateRunGroupRequestTypeDef
def get_value() -> UpdateRunGroupRequestTypeDef:
return {
"id": ...,
}
# UpdateRunGroupRequestTypeDef definition
class UpdateRunGroupRequestTypeDef(TypedDict):
id: str,
name: NotRequired[str],
maxCpus: NotRequired[int],
maxRuns: NotRequired[int],
maxDuration: NotRequired[int],
maxGpus: NotRequired[int],UpdateVariantStoreRequestTypeDef#
# UpdateVariantStoreRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import UpdateVariantStoreRequestTypeDef
def get_value() -> UpdateVariantStoreRequestTypeDef:
return {
"name": ...,
}
# UpdateVariantStoreRequestTypeDef definition
class UpdateVariantStoreRequestTypeDef(TypedDict):
name: str,
description: NotRequired[str],UpdateWorkflowRequestTypeDef#
# UpdateWorkflowRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import UpdateWorkflowRequestTypeDef
def get_value() -> UpdateWorkflowRequestTypeDef:
return {
"id": ...,
}
# UpdateWorkflowRequestTypeDef definition
class UpdateWorkflowRequestTypeDef(TypedDict):
id: str,
name: NotRequired[str],
description: NotRequired[str],
storageType: NotRequired[StorageTypeType], # (1)
storageCapacity: NotRequired[int],
readmeMarkdown: NotRequired[str],- See StorageTypeType
UpdateWorkflowVersionRequestTypeDef#
# UpdateWorkflowVersionRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import UpdateWorkflowVersionRequestTypeDef
def get_value() -> UpdateWorkflowVersionRequestTypeDef:
return {
"workflowId": ...,
}
# UpdateWorkflowVersionRequestTypeDef definition
class UpdateWorkflowVersionRequestTypeDef(TypedDict):
workflowId: str,
versionName: str,
description: NotRequired[str],
storageType: NotRequired[StorageTypeType], # (1)
storageCapacity: NotRequired[int],
readmeMarkdown: NotRequired[str],- See StorageTypeType
AcceptShareResponseTypeDef#
# AcceptShareResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import AcceptShareResponseTypeDef
def get_value() -> AcceptShareResponseTypeDef:
return {
"status": ...,
}
# AcceptShareResponseTypeDef definition
class AcceptShareResponseTypeDef(TypedDict):
status: ShareStatusType, # (1)
ResponseMetadata: ResponseMetadataTypeDef, # (2)CompleteMultipartReadSetUploadResponseTypeDef#
# CompleteMultipartReadSetUploadResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import CompleteMultipartReadSetUploadResponseTypeDef
def get_value() -> CompleteMultipartReadSetUploadResponseTypeDef:
return {
"readSetId": ...,
}
# CompleteMultipartReadSetUploadResponseTypeDef definition
class CompleteMultipartReadSetUploadResponseTypeDef(TypedDict):
readSetId: str,
ResponseMetadata: ResponseMetadataTypeDef, # (1)CreateMultipartReadSetUploadResponseTypeDef#
# CreateMultipartReadSetUploadResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import CreateMultipartReadSetUploadResponseTypeDef
def get_value() -> CreateMultipartReadSetUploadResponseTypeDef:
return {
"sequenceStoreId": ...,
}
# CreateMultipartReadSetUploadResponseTypeDef definition
class CreateMultipartReadSetUploadResponseTypeDef(TypedDict):
sequenceStoreId: str,
uploadId: str,
sourceFileType: FileTypeType, # (1)
subjectId: str,
sampleId: str,
generatedFrom: str,
referenceArn: str,
name: str,
description: str,
tags: Dict[str, str],
creationTime: datetime.datetime,
ResponseMetadata: ResponseMetadataTypeDef, # (2)- See FileTypeType
- See ResponseMetadataTypeDef
CreateRunCacheResponseTypeDef#
# CreateRunCacheResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import CreateRunCacheResponseTypeDef
def get_value() -> CreateRunCacheResponseTypeDef:
return {
"arn": ...,
}
# CreateRunCacheResponseTypeDef definition
class CreateRunCacheResponseTypeDef(TypedDict):
arn: str,
id: str,
status: RunCacheStatusType, # (1)
tags: Dict[str, str],
ResponseMetadata: ResponseMetadataTypeDef, # (2)CreateRunGroupResponseTypeDef#
# CreateRunGroupResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import CreateRunGroupResponseTypeDef
def get_value() -> CreateRunGroupResponseTypeDef:
return {
"arn": ...,
}
# CreateRunGroupResponseTypeDef definition
class CreateRunGroupResponseTypeDef(TypedDict):
arn: str,
id: str,
tags: Dict[str, str],
ResponseMetadata: ResponseMetadataTypeDef, # (1)CreateShareResponseTypeDef#
# CreateShareResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import CreateShareResponseTypeDef
def get_value() -> CreateShareResponseTypeDef:
return {
"shareId": ...,
}
# CreateShareResponseTypeDef definition
class CreateShareResponseTypeDef(TypedDict):
shareId: str,
status: ShareStatusType, # (1)
shareName: str,
ResponseMetadata: ResponseMetadataTypeDef, # (2)CreateWorkflowResponseTypeDef#
# CreateWorkflowResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import CreateWorkflowResponseTypeDef
def get_value() -> CreateWorkflowResponseTypeDef:
return {
"arn": ...,
}
# CreateWorkflowResponseTypeDef definition
class CreateWorkflowResponseTypeDef(TypedDict):
arn: str,
id: str,
status: WorkflowStatusType, # (1)
tags: Dict[str, str],
uuid: str,
ResponseMetadata: ResponseMetadataTypeDef, # (2)CreateWorkflowVersionResponseTypeDef#
# CreateWorkflowVersionResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import CreateWorkflowVersionResponseTypeDef
def get_value() -> CreateWorkflowVersionResponseTypeDef:
return {
"arn": ...,
}
# CreateWorkflowVersionResponseTypeDef definition
class CreateWorkflowVersionResponseTypeDef(TypedDict):
arn: str,
workflowId: str,
versionName: str,
status: WorkflowStatusType, # (1)
tags: Dict[str, str],
uuid: str,
ResponseMetadata: ResponseMetadataTypeDef, # (2)DeleteAnnotationStoreResponseTypeDef#
# DeleteAnnotationStoreResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import DeleteAnnotationStoreResponseTypeDef
def get_value() -> DeleteAnnotationStoreResponseTypeDef:
return {
"status": ...,
}
# DeleteAnnotationStoreResponseTypeDef definition
class DeleteAnnotationStoreResponseTypeDef(TypedDict):
status: StoreStatusType, # (1)
ResponseMetadata: ResponseMetadataTypeDef, # (2)DeleteShareResponseTypeDef#
# DeleteShareResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import DeleteShareResponseTypeDef
def get_value() -> DeleteShareResponseTypeDef:
return {
"status": ...,
}
# DeleteShareResponseTypeDef definition
class DeleteShareResponseTypeDef(TypedDict):
status: ShareStatusType, # (1)
ResponseMetadata: ResponseMetadataTypeDef, # (2)DeleteVariantStoreResponseTypeDef#
# DeleteVariantStoreResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import DeleteVariantStoreResponseTypeDef
def get_value() -> DeleteVariantStoreResponseTypeDef:
return {
"status": ...,
}
# DeleteVariantStoreResponseTypeDef definition
class DeleteVariantStoreResponseTypeDef(TypedDict):
status: StoreStatusType, # (1)
ResponseMetadata: ResponseMetadataTypeDef, # (2)EmptyResponseMetadataTypeDef#
# EmptyResponseMetadataTypeDef TypedDict usage example
from types_boto3_omics.type_defs import EmptyResponseMetadataTypeDef
def get_value() -> EmptyResponseMetadataTypeDef:
return {
"ResponseMetadata": ...,
}
# EmptyResponseMetadataTypeDef definition
class EmptyResponseMetadataTypeDef(TypedDict):
ResponseMetadata: ResponseMetadataTypeDef, # (1)GetReadSetResponseTypeDef#
# GetReadSetResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetReadSetResponseTypeDef
def get_value() -> GetReadSetResponseTypeDef:
return {
"payload": ...,
}
# GetReadSetResponseTypeDef definition
class GetReadSetResponseTypeDef(TypedDict):
payload: botocore.response.StreamingBody,
ResponseMetadata: ResponseMetadataTypeDef, # (1)GetReferenceResponseTypeDef#
# GetReferenceResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetReferenceResponseTypeDef
def get_value() -> GetReferenceResponseTypeDef:
return {
"payload": ...,
}
# GetReferenceResponseTypeDef definition
class GetReferenceResponseTypeDef(TypedDict):
payload: botocore.response.StreamingBody,
ResponseMetadata: ResponseMetadataTypeDef, # (1)GetRunCacheResponseTypeDef#
# GetRunCacheResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetRunCacheResponseTypeDef
def get_value() -> GetRunCacheResponseTypeDef:
return {
"arn": ...,
}
# GetRunCacheResponseTypeDef definition
class GetRunCacheResponseTypeDef(TypedDict):
arn: str,
cacheBehavior: CacheBehaviorType, # (1)
cacheBucketOwnerId: str,
cacheS3Uri: str,
creationTime: datetime.datetime,
description: str,
id: str,
name: str,
status: RunCacheStatusType, # (2)
tags: Dict[str, str],
ResponseMetadata: ResponseMetadataTypeDef, # (3)GetRunGroupResponseTypeDef#
# GetRunGroupResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetRunGroupResponseTypeDef
def get_value() -> GetRunGroupResponseTypeDef:
return {
"arn": ...,
}
# GetRunGroupResponseTypeDef definition
class GetRunGroupResponseTypeDef(TypedDict):
arn: str,
id: str,
name: str,
maxCpus: int,
maxRuns: int,
maxDuration: int,
creationTime: datetime.datetime,
tags: Dict[str, str],
maxGpus: int,
ResponseMetadata: ResponseMetadataTypeDef, # (1)GetS3AccessPolicyResponseTypeDef#
# GetS3AccessPolicyResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetS3AccessPolicyResponseTypeDef
def get_value() -> GetS3AccessPolicyResponseTypeDef:
return {
"s3AccessPointArn": ...,
}
# GetS3AccessPolicyResponseTypeDef definition
class GetS3AccessPolicyResponseTypeDef(TypedDict):
s3AccessPointArn: str,
storeId: str,
storeType: StoreTypeType, # (1)
updateTime: datetime.datetime,
s3AccessPolicy: str,
ResponseMetadata: ResponseMetadataTypeDef, # (2)- See StoreTypeType
- See ResponseMetadataTypeDef
ListTagsForResourceResponseTypeDef#
# ListTagsForResourceResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListTagsForResourceResponseTypeDef
def get_value() -> ListTagsForResourceResponseTypeDef:
return {
"tags": ...,
}
# ListTagsForResourceResponseTypeDef definition
class ListTagsForResourceResponseTypeDef(TypedDict):
tags: Dict[str, str],
ResponseMetadata: ResponseMetadataTypeDef, # (1)PutS3AccessPolicyResponseTypeDef#
# PutS3AccessPolicyResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import PutS3AccessPolicyResponseTypeDef
def get_value() -> PutS3AccessPolicyResponseTypeDef:
return {
"s3AccessPointArn": ...,
}
# PutS3AccessPolicyResponseTypeDef definition
class PutS3AccessPolicyResponseTypeDef(TypedDict):
s3AccessPointArn: str,
storeId: str,
storeType: StoreTypeType, # (1)
ResponseMetadata: ResponseMetadataTypeDef, # (2)- See StoreTypeType
- See ResponseMetadataTypeDef
StartAnnotationImportResponseTypeDef#
# StartAnnotationImportResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import StartAnnotationImportResponseTypeDef
def get_value() -> StartAnnotationImportResponseTypeDef:
return {
"jobId": ...,
}
# StartAnnotationImportResponseTypeDef definition
class StartAnnotationImportResponseTypeDef(TypedDict):
jobId: str,
ResponseMetadata: ResponseMetadataTypeDef, # (1)StartReadSetActivationJobResponseTypeDef#
# StartReadSetActivationJobResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import StartReadSetActivationJobResponseTypeDef
def get_value() -> StartReadSetActivationJobResponseTypeDef:
return {
"id": ...,
}
# StartReadSetActivationJobResponseTypeDef definition
class StartReadSetActivationJobResponseTypeDef(TypedDict):
id: str,
sequenceStoreId: str,
status: ReadSetActivationJobStatusType, # (1)
creationTime: datetime.datetime,
ResponseMetadata: ResponseMetadataTypeDef, # (2)StartReadSetExportJobResponseTypeDef#
# StartReadSetExportJobResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import StartReadSetExportJobResponseTypeDef
def get_value() -> StartReadSetExportJobResponseTypeDef:
return {
"id": ...,
}
# StartReadSetExportJobResponseTypeDef definition
class StartReadSetExportJobResponseTypeDef(TypedDict):
id: str,
sequenceStoreId: str,
destination: str,
status: ReadSetExportJobStatusType, # (1)
creationTime: datetime.datetime,
ResponseMetadata: ResponseMetadataTypeDef, # (2)StartReadSetImportJobResponseTypeDef#
# StartReadSetImportJobResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import StartReadSetImportJobResponseTypeDef
def get_value() -> StartReadSetImportJobResponseTypeDef:
return {
"id": ...,
}
# StartReadSetImportJobResponseTypeDef definition
class StartReadSetImportJobResponseTypeDef(TypedDict):
id: str,
sequenceStoreId: str,
roleArn: str,
status: ReadSetImportJobStatusType, # (1)
creationTime: datetime.datetime,
ResponseMetadata: ResponseMetadataTypeDef, # (2)StartReferenceImportJobResponseTypeDef#
# StartReferenceImportJobResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import StartReferenceImportJobResponseTypeDef
def get_value() -> StartReferenceImportJobResponseTypeDef:
return {
"id": ...,
}
# StartReferenceImportJobResponseTypeDef definition
class StartReferenceImportJobResponseTypeDef(TypedDict):
id: str,
referenceStoreId: str,
roleArn: str,
status: ReferenceImportJobStatusType, # (1)
creationTime: datetime.datetime,
ResponseMetadata: ResponseMetadataTypeDef, # (2)StartRunResponseTypeDef#
# StartRunResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import StartRunResponseTypeDef
def get_value() -> StartRunResponseTypeDef:
return {
"arn": ...,
}
# StartRunResponseTypeDef definition
class StartRunResponseTypeDef(TypedDict):
arn: str,
id: str,
status: RunStatusType, # (1)
tags: Dict[str, str],
uuid: str,
runOutputUri: str,
ResponseMetadata: ResponseMetadataTypeDef, # (2)- See RunStatusType
- See ResponseMetadataTypeDef
StartVariantImportResponseTypeDef#
# StartVariantImportResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import StartVariantImportResponseTypeDef
def get_value() -> StartVariantImportResponseTypeDef:
return {
"jobId": ...,
}
# StartVariantImportResponseTypeDef definition
class StartVariantImportResponseTypeDef(TypedDict):
jobId: str,
ResponseMetadata: ResponseMetadataTypeDef, # (1)UpdateAnnotationStoreVersionResponseTypeDef#
# UpdateAnnotationStoreVersionResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import UpdateAnnotationStoreVersionResponseTypeDef
def get_value() -> UpdateAnnotationStoreVersionResponseTypeDef:
return {
"storeId": ...,
}
# UpdateAnnotationStoreVersionResponseTypeDef definition
class UpdateAnnotationStoreVersionResponseTypeDef(TypedDict):
storeId: str,
id: str,
status: VersionStatusType, # (1)
name: str,
versionName: str,
description: str,
creationTime: datetime.datetime,
updateTime: datetime.datetime,
ResponseMetadata: ResponseMetadataTypeDef, # (2)UploadReadSetPartResponseTypeDef#
# UploadReadSetPartResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import UploadReadSetPartResponseTypeDef
def get_value() -> UploadReadSetPartResponseTypeDef:
return {
"checksum": ...,
}
# UploadReadSetPartResponseTypeDef definition
class UploadReadSetPartResponseTypeDef(TypedDict):
checksum: str,
ResponseMetadata: ResponseMetadataTypeDef, # (1)ActivateReadSetFilterTypeDef#
# ActivateReadSetFilterTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ActivateReadSetFilterTypeDef
def get_value() -> ActivateReadSetFilterTypeDef:
return {
"status": ...,
}
# ActivateReadSetFilterTypeDef definition
class ActivateReadSetFilterTypeDef(TypedDict):
status: NotRequired[ReadSetActivationJobStatusType], # (1)
createdAfter: NotRequired[TimestampTypeDef],
createdBefore: NotRequired[TimestampTypeDef],ExportReadSetFilterTypeDef#
# ExportReadSetFilterTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ExportReadSetFilterTypeDef
def get_value() -> ExportReadSetFilterTypeDef:
return {
"status": ...,
}
# ExportReadSetFilterTypeDef definition
class ExportReadSetFilterTypeDef(TypedDict):
status: NotRequired[ReadSetExportJobStatusType], # (1)
createdAfter: NotRequired[TimestampTypeDef],
createdBefore: NotRequired[TimestampTypeDef],ImportReadSetFilterTypeDef#
# ImportReadSetFilterTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ImportReadSetFilterTypeDef
def get_value() -> ImportReadSetFilterTypeDef:
return {
"status": ...,
}
# ImportReadSetFilterTypeDef definition
class ImportReadSetFilterTypeDef(TypedDict):
status: NotRequired[ReadSetImportJobStatusType], # (1)
createdAfter: NotRequired[TimestampTypeDef],
createdBefore: NotRequired[TimestampTypeDef],ImportReferenceFilterTypeDef#
# ImportReferenceFilterTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ImportReferenceFilterTypeDef
def get_value() -> ImportReferenceFilterTypeDef:
return {
"status": ...,
}
# ImportReferenceFilterTypeDef definition
class ImportReferenceFilterTypeDef(TypedDict):
status: NotRequired[ReferenceImportJobStatusType], # (1)
createdAfter: NotRequired[TimestampTypeDef],
createdBefore: NotRequired[TimestampTypeDef],ReadSetFilterTypeDef#
# ReadSetFilterTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ReadSetFilterTypeDef
def get_value() -> ReadSetFilterTypeDef:
return {
"name": ...,
}
# ReadSetFilterTypeDef definition
class ReadSetFilterTypeDef(TypedDict):
name: NotRequired[str],
status: NotRequired[ReadSetStatusType], # (1)
referenceArn: NotRequired[str],
createdAfter: NotRequired[TimestampTypeDef],
createdBefore: NotRequired[TimestampTypeDef],
sampleId: NotRequired[str],
subjectId: NotRequired[str],
generatedFrom: NotRequired[str],
creationType: NotRequired[CreationTypeType], # (2)- See ReadSetStatusType
- See CreationTypeType
ReadSetUploadPartListFilterTypeDef#
# ReadSetUploadPartListFilterTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ReadSetUploadPartListFilterTypeDef
def get_value() -> ReadSetUploadPartListFilterTypeDef:
return {
"createdAfter": ...,
}
# ReadSetUploadPartListFilterTypeDef definition
class ReadSetUploadPartListFilterTypeDef(TypedDict):
createdAfter: NotRequired[TimestampTypeDef],
createdBefore: NotRequired[TimestampTypeDef],ReferenceFilterTypeDef#
# ReferenceFilterTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ReferenceFilterTypeDef
def get_value() -> ReferenceFilterTypeDef:
return {
"name": ...,
}
# ReferenceFilterTypeDef definition
class ReferenceFilterTypeDef(TypedDict):
name: NotRequired[str],
md5: NotRequired[str],
createdAfter: NotRequired[TimestampTypeDef],
createdBefore: NotRequired[TimestampTypeDef],ReferenceStoreFilterTypeDef#
# ReferenceStoreFilterTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ReferenceStoreFilterTypeDef
def get_value() -> ReferenceStoreFilterTypeDef:
return {
"name": ...,
}
# ReferenceStoreFilterTypeDef definition
class ReferenceStoreFilterTypeDef(TypedDict):
name: NotRequired[str],
createdAfter: NotRequired[TimestampTypeDef],
createdBefore: NotRequired[TimestampTypeDef],SequenceStoreFilterTypeDef#
# SequenceStoreFilterTypeDef TypedDict usage example
from types_boto3_omics.type_defs import SequenceStoreFilterTypeDef
def get_value() -> SequenceStoreFilterTypeDef:
return {
"name": ...,
}
# SequenceStoreFilterTypeDef definition
class SequenceStoreFilterTypeDef(TypedDict):
name: NotRequired[str],
createdAfter: NotRequired[TimestampTypeDef],
createdBefore: NotRequired[TimestampTypeDef],
status: NotRequired[SequenceStoreStatusType], # (1)
updatedAfter: NotRequired[TimestampTypeDef],
updatedBefore: NotRequired[TimestampTypeDef],ListReadSetActivationJobsResponseTypeDef#
# ListReadSetActivationJobsResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListReadSetActivationJobsResponseTypeDef
def get_value() -> ListReadSetActivationJobsResponseTypeDef:
return {
"nextToken": ...,
}
# ListReadSetActivationJobsResponseTypeDef definition
class ListReadSetActivationJobsResponseTypeDef(TypedDict):
activationJobs: List[ActivateReadSetJobItemTypeDef], # (1)
ResponseMetadata: ResponseMetadataTypeDef, # (2)
nextToken: NotRequired[str],- See
List[ActivateReadSetJobItemTypeDef] - See ResponseMetadataTypeDef
GetReadSetActivationJobResponseTypeDef#
# GetReadSetActivationJobResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetReadSetActivationJobResponseTypeDef
def get_value() -> GetReadSetActivationJobResponseTypeDef:
return {
"id": ...,
}
# GetReadSetActivationJobResponseTypeDef definition
class GetReadSetActivationJobResponseTypeDef(TypedDict):
id: str,
sequenceStoreId: str,
status: ReadSetActivationJobStatusType, # (1)
statusMessage: str,
creationTime: datetime.datetime,
completionTime: datetime.datetime,
sources: List[ActivateReadSetSourceItemTypeDef], # (2)
ResponseMetadata: ResponseMetadataTypeDef, # (3)- See ReadSetActivationJobStatusType
- See
List[ActivateReadSetSourceItemTypeDef] - See ResponseMetadataTypeDef
ListAnnotationImportJobsResponseTypeDef#
# ListAnnotationImportJobsResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListAnnotationImportJobsResponseTypeDef
def get_value() -> ListAnnotationImportJobsResponseTypeDef:
return {
"annotationImportJobs": ...,
}
# ListAnnotationImportJobsResponseTypeDef definition
class ListAnnotationImportJobsResponseTypeDef(TypedDict):
annotationImportJobs: List[AnnotationImportJobItemTypeDef], # (1)
ResponseMetadata: ResponseMetadataTypeDef, # (2)
nextToken: NotRequired[str],- See
List[AnnotationImportJobItemTypeDef] - See ResponseMetadataTypeDef
CreateVariantStoreResponseTypeDef#
# CreateVariantStoreResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import CreateVariantStoreResponseTypeDef
def get_value() -> CreateVariantStoreResponseTypeDef:
return {
"id": ...,
}
# CreateVariantStoreResponseTypeDef definition
class CreateVariantStoreResponseTypeDef(TypedDict):
id: str,
reference: ReferenceItemTypeDef, # (1)
status: StoreStatusType, # (2)
name: str,
creationTime: datetime.datetime,
ResponseMetadata: ResponseMetadataTypeDef, # (3)UpdateVariantStoreResponseTypeDef#
# UpdateVariantStoreResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import UpdateVariantStoreResponseTypeDef
def get_value() -> UpdateVariantStoreResponseTypeDef:
return {
"id": ...,
}
# UpdateVariantStoreResponseTypeDef definition
class UpdateVariantStoreResponseTypeDef(TypedDict):
id: str,
reference: ReferenceItemTypeDef, # (1)
status: StoreStatusType, # (2)
name: str,
description: str,
creationTime: datetime.datetime,
updateTime: datetime.datetime,
ResponseMetadata: ResponseMetadataTypeDef, # (3)AnnotationStoreItemTypeDef#
# AnnotationStoreItemTypeDef TypedDict usage example
from types_boto3_omics.type_defs import AnnotationStoreItemTypeDef
def get_value() -> AnnotationStoreItemTypeDef:
return {
"id": ...,
}
# AnnotationStoreItemTypeDef definition
class AnnotationStoreItemTypeDef(TypedDict):
id: str,
reference: ReferenceItemTypeDef, # (1)
status: StoreStatusType, # (2)
storeArn: str,
name: str,
storeFormat: StoreFormatType, # (3)
description: str,
sseConfig: SseConfigTypeDef, # (4)
creationTime: datetime.datetime,
updateTime: datetime.datetime,
statusMessage: str,
storeSizeBytes: int,- See ReferenceItemTypeDef
- See StoreStatusType
- See StoreFormatType
- See SseConfigTypeDef
CreateReferenceStoreRequestTypeDef#
# CreateReferenceStoreRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import CreateReferenceStoreRequestTypeDef
def get_value() -> CreateReferenceStoreRequestTypeDef:
return {
"name": ...,
}
# CreateReferenceStoreRequestTypeDef definition
class CreateReferenceStoreRequestTypeDef(TypedDict):
name: str,
description: NotRequired[str],
sseConfig: NotRequired[SseConfigTypeDef], # (1)
tags: NotRequired[Mapping[str, str]],
clientToken: NotRequired[str],- See SseConfigTypeDef
CreateReferenceStoreResponseTypeDef#
# CreateReferenceStoreResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import CreateReferenceStoreResponseTypeDef
def get_value() -> CreateReferenceStoreResponseTypeDef:
return {
"id": ...,
}
# CreateReferenceStoreResponseTypeDef definition
class CreateReferenceStoreResponseTypeDef(TypedDict):
id: str,
arn: str,
name: str,
description: str,
sseConfig: SseConfigTypeDef, # (1)
creationTime: datetime.datetime,
ResponseMetadata: ResponseMetadataTypeDef, # (2)CreateVariantStoreRequestTypeDef#
# CreateVariantStoreRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import CreateVariantStoreRequestTypeDef
def get_value() -> CreateVariantStoreRequestTypeDef:
return {
"reference": ...,
}
# CreateVariantStoreRequestTypeDef definition
class CreateVariantStoreRequestTypeDef(TypedDict):
reference: ReferenceItemTypeDef, # (1)
name: NotRequired[str],
description: NotRequired[str],
tags: NotRequired[Mapping[str, str]],
sseConfig: NotRequired[SseConfigTypeDef], # (2)- See ReferenceItemTypeDef
- See SseConfigTypeDef
GetReferenceStoreResponseTypeDef#
# GetReferenceStoreResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetReferenceStoreResponseTypeDef
def get_value() -> GetReferenceStoreResponseTypeDef:
return {
"id": ...,
}
# GetReferenceStoreResponseTypeDef definition
class GetReferenceStoreResponseTypeDef(TypedDict):
id: str,
arn: str,
name: str,
description: str,
sseConfig: SseConfigTypeDef, # (1)
creationTime: datetime.datetime,
ResponseMetadata: ResponseMetadataTypeDef, # (2)GetVariantStoreResponseTypeDef#
# GetVariantStoreResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetVariantStoreResponseTypeDef
def get_value() -> GetVariantStoreResponseTypeDef:
return {
"id": ...,
}
# GetVariantStoreResponseTypeDef definition
class GetVariantStoreResponseTypeDef(TypedDict):
id: str,
reference: ReferenceItemTypeDef, # (1)
status: StoreStatusType, # (2)
storeArn: str,
name: str,
description: str,
sseConfig: SseConfigTypeDef, # (3)
creationTime: datetime.datetime,
updateTime: datetime.datetime,
tags: Dict[str, str],
statusMessage: str,
storeSizeBytes: int,
ResponseMetadata: ResponseMetadataTypeDef, # (4)- See ReferenceItemTypeDef
- See StoreStatusType
- See SseConfigTypeDef
- See ResponseMetadataTypeDef
ReferenceStoreDetailTypeDef#
# ReferenceStoreDetailTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ReferenceStoreDetailTypeDef
def get_value() -> ReferenceStoreDetailTypeDef:
return {
"arn": ...,
}
# ReferenceStoreDetailTypeDef definition
class ReferenceStoreDetailTypeDef(TypedDict):
arn: str,
id: str,
creationTime: datetime.datetime,
name: NotRequired[str],
description: NotRequired[str],
sseConfig: NotRequired[SseConfigTypeDef], # (1)- See SseConfigTypeDef
SequenceStoreDetailTypeDef#
# SequenceStoreDetailTypeDef TypedDict usage example
from types_boto3_omics.type_defs import SequenceStoreDetailTypeDef
def get_value() -> SequenceStoreDetailTypeDef:
return {
"arn": ...,
}
# SequenceStoreDetailTypeDef definition
class SequenceStoreDetailTypeDef(TypedDict):
arn: str,
id: str,
creationTime: datetime.datetime,
name: NotRequired[str],
description: NotRequired[str],
sseConfig: NotRequired[SseConfigTypeDef], # (1)
fallbackLocation: NotRequired[str],
eTagAlgorithmFamily: NotRequired[ETagAlgorithmFamilyType], # (2)
status: NotRequired[SequenceStoreStatusType], # (3)
statusMessage: NotRequired[str],
updateTime: NotRequired[datetime.datetime],VariantStoreItemTypeDef#
# VariantStoreItemTypeDef TypedDict usage example
from types_boto3_omics.type_defs import VariantStoreItemTypeDef
def get_value() -> VariantStoreItemTypeDef:
return {
"id": ...,
}
# VariantStoreItemTypeDef definition
class VariantStoreItemTypeDef(TypedDict):
id: str,
reference: ReferenceItemTypeDef, # (1)
status: StoreStatusType, # (2)
storeArn: str,
name: str,
description: str,
sseConfig: SseConfigTypeDef, # (3)
creationTime: datetime.datetime,
updateTime: datetime.datetime,
statusMessage: str,
storeSizeBytes: int,- See ReferenceItemTypeDef
- See StoreStatusType
- See SseConfigTypeDef
ListAnnotationStoreVersionsResponseTypeDef#
# ListAnnotationStoreVersionsResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListAnnotationStoreVersionsResponseTypeDef
def get_value() -> ListAnnotationStoreVersionsResponseTypeDef:
return {
"annotationStoreVersions": ...,
}
# ListAnnotationStoreVersionsResponseTypeDef definition
class ListAnnotationStoreVersionsResponseTypeDef(TypedDict):
annotationStoreVersions: List[AnnotationStoreVersionItemTypeDef], # (1)
ResponseMetadata: ResponseMetadataTypeDef, # (2)
nextToken: NotRequired[str],- See
List[AnnotationStoreVersionItemTypeDef] - See ResponseMetadataTypeDef
BatchDeleteReadSetResponseTypeDef#
# BatchDeleteReadSetResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import BatchDeleteReadSetResponseTypeDef
def get_value() -> BatchDeleteReadSetResponseTypeDef:
return {
"errors": ...,
}
# BatchDeleteReadSetResponseTypeDef definition
class BatchDeleteReadSetResponseTypeDef(TypedDict):
errors: List[ReadSetBatchErrorTypeDef], # (1)
ResponseMetadata: ResponseMetadataTypeDef, # (2)- See
List[ReadSetBatchErrorTypeDef] - See ResponseMetadataTypeDef
UploadReadSetPartRequestTypeDef#
# UploadReadSetPartRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import UploadReadSetPartRequestTypeDef
def get_value() -> UploadReadSetPartRequestTypeDef:
return {
"sequenceStoreId": ...,
}
# UploadReadSetPartRequestTypeDef definition
class UploadReadSetPartRequestTypeDef(TypedDict):
sequenceStoreId: str,
uploadId: str,
partSource: ReadSetPartSourceType, # (1)
partNumber: int,
payload: BlobTypeDef,CompleteMultipartReadSetUploadRequestTypeDef#
# CompleteMultipartReadSetUploadRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import CompleteMultipartReadSetUploadRequestTypeDef
def get_value() -> CompleteMultipartReadSetUploadRequestTypeDef:
return {
"sequenceStoreId": ...,
}
# CompleteMultipartReadSetUploadRequestTypeDef definition
class CompleteMultipartReadSetUploadRequestTypeDef(TypedDict):
sequenceStoreId: str,
uploadId: str,
parts: Sequence[CompleteReadSetUploadPartListItemTypeDef], # (1)- See
Sequence[CompleteReadSetUploadPartListItemTypeDef]
ContainerRegistryMapOutputTypeDef#
# ContainerRegistryMapOutputTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ContainerRegistryMapOutputTypeDef
def get_value() -> ContainerRegistryMapOutputTypeDef:
return {
"registryMappings": ...,
}
# ContainerRegistryMapOutputTypeDef definition
class ContainerRegistryMapOutputTypeDef(TypedDict):
registryMappings: NotRequired[List[RegistryMappingTypeDef]], # (1)
imageMappings: NotRequired[List[ImageMappingTypeDef]], # (2)- See
List[RegistryMappingTypeDef] - See
List[ImageMappingTypeDef]
ContainerRegistryMapTypeDef#
# ContainerRegistryMapTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ContainerRegistryMapTypeDef
def get_value() -> ContainerRegistryMapTypeDef:
return {
"registryMappings": ...,
}
# ContainerRegistryMapTypeDef definition
class ContainerRegistryMapTypeDef(TypedDict):
registryMappings: NotRequired[Sequence[RegistryMappingTypeDef]], # (1)
imageMappings: NotRequired[Sequence[ImageMappingTypeDef]], # (2)- See
Sequence[RegistryMappingTypeDef] - See
Sequence[ImageMappingTypeDef]
CreateSequenceStoreRequestTypeDef#
# CreateSequenceStoreRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import CreateSequenceStoreRequestTypeDef
def get_value() -> CreateSequenceStoreRequestTypeDef:
return {
"name": ...,
}
# CreateSequenceStoreRequestTypeDef definition
class CreateSequenceStoreRequestTypeDef(TypedDict):
name: str,
description: NotRequired[str],
sseConfig: NotRequired[SseConfigTypeDef], # (1)
tags: NotRequired[Mapping[str, str]],
clientToken: NotRequired[str],
fallbackLocation: NotRequired[str],
eTagAlgorithmFamily: NotRequired[ETagAlgorithmFamilyType], # (2)
propagatedSetLevelTags: NotRequired[Sequence[str]],
s3AccessConfig: NotRequired[S3AccessConfigTypeDef], # (3)UpdateSequenceStoreRequestTypeDef#
# UpdateSequenceStoreRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import UpdateSequenceStoreRequestTypeDef
def get_value() -> UpdateSequenceStoreRequestTypeDef:
return {
"id": ...,
}
# UpdateSequenceStoreRequestTypeDef definition
class UpdateSequenceStoreRequestTypeDef(TypedDict):
id: str,
name: NotRequired[str],
description: NotRequired[str],
clientToken: NotRequired[str],
fallbackLocation: NotRequired[str],
propagatedSetLevelTags: NotRequired[Sequence[str]],
s3AccessConfig: NotRequired[S3AccessConfigTypeDef], # (1)CreateSequenceStoreResponseTypeDef#
# CreateSequenceStoreResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import CreateSequenceStoreResponseTypeDef
def get_value() -> CreateSequenceStoreResponseTypeDef:
return {
"id": ...,
}
# CreateSequenceStoreResponseTypeDef definition
class CreateSequenceStoreResponseTypeDef(TypedDict):
id: str,
arn: str,
name: str,
description: str,
sseConfig: SseConfigTypeDef, # (1)
creationTime: datetime.datetime,
fallbackLocation: str,
eTagAlgorithmFamily: ETagAlgorithmFamilyType, # (2)
status: SequenceStoreStatusType, # (3)
statusMessage: str,
propagatedSetLevelTags: List[str],
s3Access: SequenceStoreS3AccessTypeDef, # (4)
ResponseMetadata: ResponseMetadataTypeDef, # (5)- See SseConfigTypeDef
- See ETagAlgorithmFamilyType
- See SequenceStoreStatusType
- See SequenceStoreS3AccessTypeDef
- See ResponseMetadataTypeDef
GetSequenceStoreResponseTypeDef#
# GetSequenceStoreResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetSequenceStoreResponseTypeDef
def get_value() -> GetSequenceStoreResponseTypeDef:
return {
"id": ...,
}
# GetSequenceStoreResponseTypeDef definition
class GetSequenceStoreResponseTypeDef(TypedDict):
id: str,
arn: str,
name: str,
description: str,
sseConfig: SseConfigTypeDef, # (1)
creationTime: datetime.datetime,
fallbackLocation: str,
s3Access: SequenceStoreS3AccessTypeDef, # (2)
eTagAlgorithmFamily: ETagAlgorithmFamilyType, # (3)
status: SequenceStoreStatusType, # (4)
statusMessage: str,
propagatedSetLevelTags: List[str],
updateTime: datetime.datetime,
ResponseMetadata: ResponseMetadataTypeDef, # (5)- See SseConfigTypeDef
- See SequenceStoreS3AccessTypeDef
- See ETagAlgorithmFamilyType
- See SequenceStoreStatusType
- See ResponseMetadataTypeDef
UpdateSequenceStoreResponseTypeDef#
# UpdateSequenceStoreResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import UpdateSequenceStoreResponseTypeDef
def get_value() -> UpdateSequenceStoreResponseTypeDef:
return {
"id": ...,
}
# UpdateSequenceStoreResponseTypeDef definition
class UpdateSequenceStoreResponseTypeDef(TypedDict):
id: str,
arn: str,
name: str,
description: str,
sseConfig: SseConfigTypeDef, # (1)
creationTime: datetime.datetime,
updateTime: datetime.datetime,
propagatedSetLevelTags: List[str],
status: SequenceStoreStatusType, # (2)
statusMessage: str,
fallbackLocation: str,
s3Access: SequenceStoreS3AccessTypeDef, # (3)
eTagAlgorithmFamily: ETagAlgorithmFamilyType, # (4)
ResponseMetadata: ResponseMetadataTypeDef, # (5)- See SseConfigTypeDef
- See SequenceStoreStatusType
- See SequenceStoreS3AccessTypeDef
- See ETagAlgorithmFamilyType
- See ResponseMetadataTypeDef
DefinitionRepositoryDetailsTypeDef#
# DefinitionRepositoryDetailsTypeDef TypedDict usage example
from types_boto3_omics.type_defs import DefinitionRepositoryDetailsTypeDef
def get_value() -> DefinitionRepositoryDetailsTypeDef:
return {
"connectionArn": ...,
}
# DefinitionRepositoryDetailsTypeDef definition
class DefinitionRepositoryDetailsTypeDef(TypedDict):
connectionArn: NotRequired[str],
fullRepositoryId: NotRequired[str],
sourceReference: NotRequired[SourceReferenceTypeDef], # (1)
providerType: NotRequired[str],
providerEndpoint: NotRequired[str],DefinitionRepositoryTypeDef#
# DefinitionRepositoryTypeDef TypedDict usage example
from types_boto3_omics.type_defs import DefinitionRepositoryTypeDef
def get_value() -> DefinitionRepositoryTypeDef:
return {
"connectionArn": ...,
}
# DefinitionRepositoryTypeDef definition
class DefinitionRepositoryTypeDef(TypedDict):
connectionArn: str,
fullRepositoryId: str,
sourceReference: NotRequired[SourceReferenceTypeDef], # (1)
excludeFilePatterns: NotRequired[Sequence[str]],DeleteAnnotationStoreVersionsResponseTypeDef#
# DeleteAnnotationStoreVersionsResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import DeleteAnnotationStoreVersionsResponseTypeDef
def get_value() -> DeleteAnnotationStoreVersionsResponseTypeDef:
return {
"errors": ...,
}
# DeleteAnnotationStoreVersionsResponseTypeDef definition
class DeleteAnnotationStoreVersionsResponseTypeDef(TypedDict):
errors: List[VersionDeleteErrorTypeDef], # (1)
ResponseMetadata: ResponseMetadataTypeDef, # (2)- See
List[VersionDeleteErrorTypeDef] - See ResponseMetadataTypeDef
GetReadSetExportJobResponseTypeDef#
# GetReadSetExportJobResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetReadSetExportJobResponseTypeDef
def get_value() -> GetReadSetExportJobResponseTypeDef:
return {
"id": ...,
}
# GetReadSetExportJobResponseTypeDef definition
class GetReadSetExportJobResponseTypeDef(TypedDict):
id: str,
sequenceStoreId: str,
destination: str,
status: ReadSetExportJobStatusType, # (1)
statusMessage: str,
creationTime: datetime.datetime,
completionTime: datetime.datetime,
readSets: List[ExportReadSetDetailTypeDef], # (2)
ResponseMetadata: ResponseMetadataTypeDef, # (3)- See ReadSetExportJobStatusType
- See
List[ExportReadSetDetailTypeDef] - See ResponseMetadataTypeDef
ListReadSetExportJobsResponseTypeDef#
# ListReadSetExportJobsResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListReadSetExportJobsResponseTypeDef
def get_value() -> ListReadSetExportJobsResponseTypeDef:
return {
"nextToken": ...,
}
# ListReadSetExportJobsResponseTypeDef definition
class ListReadSetExportJobsResponseTypeDef(TypedDict):
exportJobs: List[ExportReadSetJobDetailTypeDef], # (1)
ResponseMetadata: ResponseMetadataTypeDef, # (2)
nextToken: NotRequired[str],- See
List[ExportReadSetJobDetailTypeDef] - See ResponseMetadataTypeDef
StartReadSetExportJobRequestTypeDef#
# StartReadSetExportJobRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import StartReadSetExportJobRequestTypeDef
def get_value() -> StartReadSetExportJobRequestTypeDef:
return {
"sequenceStoreId": ...,
}
# StartReadSetExportJobRequestTypeDef definition
class StartReadSetExportJobRequestTypeDef(TypedDict):
sequenceStoreId: str,
destination: str,
roleArn: str,
sources: Sequence[ExportReadSetTypeDef], # (1)
clientToken: NotRequired[str],- See
Sequence[ExportReadSetTypeDef]
FileInformationTypeDef#
# FileInformationTypeDef TypedDict usage example
from types_boto3_omics.type_defs import FileInformationTypeDef
def get_value() -> FileInformationTypeDef:
return {
"totalParts": ...,
}
# FileInformationTypeDef definition
class FileInformationTypeDef(TypedDict):
totalParts: NotRequired[int],
partSize: NotRequired[int],
contentLength: NotRequired[int],
s3Access: NotRequired[ReadSetS3AccessTypeDef], # (1)ListSharesRequestTypeDef#
# ListSharesRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListSharesRequestTypeDef
def get_value() -> ListSharesRequestTypeDef:
return {
"resourceOwner": ...,
}
# ListSharesRequestTypeDef definition
class ListSharesRequestTypeDef(TypedDict):
resourceOwner: ResourceOwnerType, # (1)
filter: NotRequired[FilterTypeDef], # (2)
nextToken: NotRequired[str],
maxResults: NotRequired[int],- See ResourceOwnerType
- See FilterTypeDef
GetAnnotationImportRequestWaitTypeDef#
# GetAnnotationImportRequestWaitTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetAnnotationImportRequestWaitTypeDef
def get_value() -> GetAnnotationImportRequestWaitTypeDef:
return {
"jobId": ...,
}
# GetAnnotationImportRequestWaitTypeDef definition
class GetAnnotationImportRequestWaitTypeDef(TypedDict):
jobId: str,
WaiterConfig: NotRequired[WaiterConfigTypeDef], # (1)GetAnnotationStoreRequestWaitExtraTypeDef#
# GetAnnotationStoreRequestWaitExtraTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetAnnotationStoreRequestWaitExtraTypeDef
def get_value() -> GetAnnotationStoreRequestWaitExtraTypeDef:
return {
"name": ...,
}
# GetAnnotationStoreRequestWaitExtraTypeDef definition
class GetAnnotationStoreRequestWaitExtraTypeDef(TypedDict):
name: str,
WaiterConfig: NotRequired[WaiterConfigTypeDef], # (1)GetAnnotationStoreRequestWaitTypeDef#
# GetAnnotationStoreRequestWaitTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetAnnotationStoreRequestWaitTypeDef
def get_value() -> GetAnnotationStoreRequestWaitTypeDef:
return {
"name": ...,
}
# GetAnnotationStoreRequestWaitTypeDef definition
class GetAnnotationStoreRequestWaitTypeDef(TypedDict):
name: str,
WaiterConfig: NotRequired[WaiterConfigTypeDef], # (1)GetAnnotationStoreVersionRequestWaitExtraTypeDef#
# GetAnnotationStoreVersionRequestWaitExtraTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetAnnotationStoreVersionRequestWaitExtraTypeDef
def get_value() -> GetAnnotationStoreVersionRequestWaitExtraTypeDef:
return {
"name": ...,
}
# GetAnnotationStoreVersionRequestWaitExtraTypeDef definition
class GetAnnotationStoreVersionRequestWaitExtraTypeDef(TypedDict):
name: str,
versionName: str,
WaiterConfig: NotRequired[WaiterConfigTypeDef], # (1)GetAnnotationStoreVersionRequestWaitTypeDef#
# GetAnnotationStoreVersionRequestWaitTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetAnnotationStoreVersionRequestWaitTypeDef
def get_value() -> GetAnnotationStoreVersionRequestWaitTypeDef:
return {
"name": ...,
}
# GetAnnotationStoreVersionRequestWaitTypeDef definition
class GetAnnotationStoreVersionRequestWaitTypeDef(TypedDict):
name: str,
versionName: str,
WaiterConfig: NotRequired[WaiterConfigTypeDef], # (1)GetReadSetActivationJobRequestWaitTypeDef#
# GetReadSetActivationJobRequestWaitTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetReadSetActivationJobRequestWaitTypeDef
def get_value() -> GetReadSetActivationJobRequestWaitTypeDef:
return {
"id": ...,
}
# GetReadSetActivationJobRequestWaitTypeDef definition
class GetReadSetActivationJobRequestWaitTypeDef(TypedDict):
id: str,
sequenceStoreId: str,
WaiterConfig: NotRequired[WaiterConfigTypeDef], # (1)GetReadSetExportJobRequestWaitTypeDef#
# GetReadSetExportJobRequestWaitTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetReadSetExportJobRequestWaitTypeDef
def get_value() -> GetReadSetExportJobRequestWaitTypeDef:
return {
"sequenceStoreId": ...,
}
# GetReadSetExportJobRequestWaitTypeDef definition
class GetReadSetExportJobRequestWaitTypeDef(TypedDict):
sequenceStoreId: str,
id: str,
WaiterConfig: NotRequired[WaiterConfigTypeDef], # (1)GetReadSetImportJobRequestWaitTypeDef#
# GetReadSetImportJobRequestWaitTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetReadSetImportJobRequestWaitTypeDef
def get_value() -> GetReadSetImportJobRequestWaitTypeDef:
return {
"id": ...,
}
# GetReadSetImportJobRequestWaitTypeDef definition
class GetReadSetImportJobRequestWaitTypeDef(TypedDict):
id: str,
sequenceStoreId: str,
WaiterConfig: NotRequired[WaiterConfigTypeDef], # (1)GetReferenceImportJobRequestWaitTypeDef#
# GetReferenceImportJobRequestWaitTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetReferenceImportJobRequestWaitTypeDef
def get_value() -> GetReferenceImportJobRequestWaitTypeDef:
return {
"id": ...,
}
# GetReferenceImportJobRequestWaitTypeDef definition
class GetReferenceImportJobRequestWaitTypeDef(TypedDict):
id: str,
referenceStoreId: str,
WaiterConfig: NotRequired[WaiterConfigTypeDef], # (1)GetRunRequestWaitExtraTypeDef#
# GetRunRequestWaitExtraTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetRunRequestWaitExtraTypeDef
def get_value() -> GetRunRequestWaitExtraTypeDef:
return {
"id": ...,
}
# GetRunRequestWaitExtraTypeDef definition
class GetRunRequestWaitExtraTypeDef(TypedDict):
id: str,
export: NotRequired[Sequence[RunExportType]], # (1)
WaiterConfig: NotRequired[WaiterConfigTypeDef], # (2)- See
Sequence[Literal['DEFINITION']] - See WaiterConfigTypeDef
GetRunRequestWaitTypeDef#
# GetRunRequestWaitTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetRunRequestWaitTypeDef
def get_value() -> GetRunRequestWaitTypeDef:
return {
"id": ...,
}
# GetRunRequestWaitTypeDef definition
class GetRunRequestWaitTypeDef(TypedDict):
id: str,
export: NotRequired[Sequence[RunExportType]], # (1)
WaiterConfig: NotRequired[WaiterConfigTypeDef], # (2)- See
Sequence[Literal['DEFINITION']] - See WaiterConfigTypeDef
GetRunTaskRequestWaitExtraTypeDef#
# GetRunTaskRequestWaitExtraTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetRunTaskRequestWaitExtraTypeDef
def get_value() -> GetRunTaskRequestWaitExtraTypeDef:
return {
"id": ...,
}
# GetRunTaskRequestWaitExtraTypeDef definition
class GetRunTaskRequestWaitExtraTypeDef(TypedDict):
id: str,
taskId: str,
WaiterConfig: NotRequired[WaiterConfigTypeDef], # (1)GetRunTaskRequestWaitTypeDef#
# GetRunTaskRequestWaitTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetRunTaskRequestWaitTypeDef
def get_value() -> GetRunTaskRequestWaitTypeDef:
return {
"id": ...,
}
# GetRunTaskRequestWaitTypeDef definition
class GetRunTaskRequestWaitTypeDef(TypedDict):
id: str,
taskId: str,
WaiterConfig: NotRequired[WaiterConfigTypeDef], # (1)GetVariantImportRequestWaitTypeDef#
# GetVariantImportRequestWaitTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetVariantImportRequestWaitTypeDef
def get_value() -> GetVariantImportRequestWaitTypeDef:
return {
"jobId": ...,
}
# GetVariantImportRequestWaitTypeDef definition
class GetVariantImportRequestWaitTypeDef(TypedDict):
jobId: str,
WaiterConfig: NotRequired[WaiterConfigTypeDef], # (1)GetVariantStoreRequestWaitExtraTypeDef#
# GetVariantStoreRequestWaitExtraTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetVariantStoreRequestWaitExtraTypeDef
def get_value() -> GetVariantStoreRequestWaitExtraTypeDef:
return {
"name": ...,
}
# GetVariantStoreRequestWaitExtraTypeDef definition
class GetVariantStoreRequestWaitExtraTypeDef(TypedDict):
name: str,
WaiterConfig: NotRequired[WaiterConfigTypeDef], # (1)GetVariantStoreRequestWaitTypeDef#
# GetVariantStoreRequestWaitTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetVariantStoreRequestWaitTypeDef
def get_value() -> GetVariantStoreRequestWaitTypeDef:
return {
"name": ...,
}
# GetVariantStoreRequestWaitTypeDef definition
class GetVariantStoreRequestWaitTypeDef(TypedDict):
name: str,
WaiterConfig: NotRequired[WaiterConfigTypeDef], # (1)GetWorkflowRequestWaitTypeDef#
# GetWorkflowRequestWaitTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetWorkflowRequestWaitTypeDef
def get_value() -> GetWorkflowRequestWaitTypeDef:
return {
"id": ...,
}
# GetWorkflowRequestWaitTypeDef definition
class GetWorkflowRequestWaitTypeDef(TypedDict):
id: str,
type: NotRequired[WorkflowTypeType], # (1)
export: NotRequired[Sequence[WorkflowExportType]], # (2)
workflowOwnerId: NotRequired[str],
WaiterConfig: NotRequired[WaiterConfigTypeDef], # (3)- See WorkflowTypeType
- See
Sequence[WorkflowExportType] - See WaiterConfigTypeDef
GetWorkflowVersionRequestWaitTypeDef#
# GetWorkflowVersionRequestWaitTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetWorkflowVersionRequestWaitTypeDef
def get_value() -> GetWorkflowVersionRequestWaitTypeDef:
return {
"workflowId": ...,
}
# GetWorkflowVersionRequestWaitTypeDef definition
class GetWorkflowVersionRequestWaitTypeDef(TypedDict):
workflowId: str,
versionName: str,
type: NotRequired[WorkflowTypeType], # (1)
export: NotRequired[Sequence[WorkflowExportType]], # (2)
workflowOwnerId: NotRequired[str],
WaiterConfig: NotRequired[WaiterConfigTypeDef], # (3)- See WorkflowTypeType
- See
Sequence[WorkflowExportType] - See WaiterConfigTypeDef
ReadSetListItemTypeDef#
# ReadSetListItemTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ReadSetListItemTypeDef
def get_value() -> ReadSetListItemTypeDef:
return {
"id": ...,
}
# ReadSetListItemTypeDef definition
class ReadSetListItemTypeDef(TypedDict):
id: str,
arn: str,
sequenceStoreId: str,
status: ReadSetStatusType, # (1)
fileType: FileTypeType, # (2)
creationTime: datetime.datetime,
subjectId: NotRequired[str],
sampleId: NotRequired[str],
name: NotRequired[str],
description: NotRequired[str],
referenceArn: NotRequired[str],
sequenceInformation: NotRequired[SequenceInformationTypeDef], # (3)
statusMessage: NotRequired[str],
creationType: NotRequired[CreationTypeType], # (4)
etag: NotRequired[ETagTypeDef], # (5)- See ReadSetStatusType
- See FileTypeType
- See SequenceInformationTypeDef
- See CreationTypeType
- See ETagTypeDef
GetReferenceImportJobResponseTypeDef#
# GetReferenceImportJobResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetReferenceImportJobResponseTypeDef
def get_value() -> GetReferenceImportJobResponseTypeDef:
return {
"id": ...,
}
# GetReferenceImportJobResponseTypeDef definition
class GetReferenceImportJobResponseTypeDef(TypedDict):
id: str,
referenceStoreId: str,
roleArn: str,
status: ReferenceImportJobStatusType, # (1)
statusMessage: str,
creationTime: datetime.datetime,
completionTime: datetime.datetime,
sources: List[ImportReferenceSourceItemTypeDef], # (2)
ResponseMetadata: ResponseMetadataTypeDef, # (3)- See ReferenceImportJobStatusType
- See
List[ImportReferenceSourceItemTypeDef] - See ResponseMetadataTypeDef
GetRunResponseTypeDef#
# GetRunResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetRunResponseTypeDef
def get_value() -> GetRunResponseTypeDef:
return {
"arn": ...,
}
# GetRunResponseTypeDef definition
class GetRunResponseTypeDef(TypedDict):
arn: str,
id: str,
cacheId: str,
cacheBehavior: CacheBehaviorType, # (1)
engineVersion: str,
status: RunStatusType, # (2)
workflowId: str,
workflowType: WorkflowTypeType, # (3)
runId: str,
roleArn: str,
name: str,
runGroupId: str,
priority: int,
definition: str,
digest: str,
parameters: Dict[str, Any],
storageCapacity: int,
outputUri: str,
logLevel: RunLogLevelType, # (4)
resourceDigests: Dict[str, str],
startedBy: str,
creationTime: datetime.datetime,
startTime: datetime.datetime,
stopTime: datetime.datetime,
statusMessage: str,
tags: Dict[str, str],
accelerators: AcceleratorsType, # (5)
retentionMode: RunRetentionModeType, # (6)
failureReason: str,
logLocation: RunLogLocationTypeDef, # (7)
uuid: str,
runOutputUri: str,
storageType: StorageTypeType, # (8)
workflowOwnerId: str,
workflowVersionName: str,
workflowUuid: str,
ResponseMetadata: ResponseMetadataTypeDef, # (9)- See CacheBehaviorType
- See RunStatusType
- See WorkflowTypeType
- See RunLogLevelType
- See AcceleratorsType
- See RunRetentionModeType
- See RunLogLocationTypeDef
- See StorageTypeType
- See ResponseMetadataTypeDef
GetRunTaskResponseTypeDef#
# GetRunTaskResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetRunTaskResponseTypeDef
def get_value() -> GetRunTaskResponseTypeDef:
return {
"taskId": ...,
}
# GetRunTaskResponseTypeDef definition
class GetRunTaskResponseTypeDef(TypedDict):
taskId: str,
status: TaskStatusType, # (1)
name: str,
cpus: int,
cacheHit: bool,
cacheS3Uri: str,
memory: int,
creationTime: datetime.datetime,
startTime: datetime.datetime,
stopTime: datetime.datetime,
statusMessage: str,
logStream: str,
gpus: int,
instanceType: str,
failureReason: str,
imageDetails: ImageDetailsTypeDef, # (2)
ResponseMetadata: ResponseMetadataTypeDef, # (3)- See TaskStatusType
- See ImageDetailsTypeDef
- See ResponseMetadataTypeDef
GetShareResponseTypeDef#
# GetShareResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetShareResponseTypeDef
def get_value() -> GetShareResponseTypeDef:
return {
"share": ...,
}
# GetShareResponseTypeDef definition
class GetShareResponseTypeDef(TypedDict):
share: ShareDetailsTypeDef, # (1)
ResponseMetadata: ResponseMetadataTypeDef, # (2)ListSharesResponseTypeDef#
# ListSharesResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListSharesResponseTypeDef
def get_value() -> ListSharesResponseTypeDef:
return {
"shares": ...,
}
# ListSharesResponseTypeDef definition
class ListSharesResponseTypeDef(TypedDict):
shares: List[ShareDetailsTypeDef], # (1)
ResponseMetadata: ResponseMetadataTypeDef, # (2)
nextToken: NotRequired[str],- See
List[ShareDetailsTypeDef] - See ResponseMetadataTypeDef
GetVariantImportResponseTypeDef#
# GetVariantImportResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetVariantImportResponseTypeDef
def get_value() -> GetVariantImportResponseTypeDef:
return {
"id": ...,
}
# GetVariantImportResponseTypeDef definition
class GetVariantImportResponseTypeDef(TypedDict):
id: str,
destinationName: str,
roleArn: str,
status: JobStatusType, # (1)
statusMessage: str,
creationTime: datetime.datetime,
updateTime: datetime.datetime,
completionTime: datetime.datetime,
items: List[VariantImportItemDetailTypeDef], # (2)
runLeftNormalization: bool,
annotationFields: Dict[str, str],
ResponseMetadata: ResponseMetadataTypeDef, # (3)- See JobStatusType
- See
List[VariantImportItemDetailTypeDef] - See ResponseMetadataTypeDef
ListReadSetImportJobsResponseTypeDef#
# ListReadSetImportJobsResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListReadSetImportJobsResponseTypeDef
def get_value() -> ListReadSetImportJobsResponseTypeDef:
return {
"nextToken": ...,
}
# ListReadSetImportJobsResponseTypeDef definition
class ListReadSetImportJobsResponseTypeDef(TypedDict):
importJobs: List[ImportReadSetJobItemTypeDef], # (1)
ResponseMetadata: ResponseMetadataTypeDef, # (2)
nextToken: NotRequired[str],- See
List[ImportReadSetJobItemTypeDef] - See ResponseMetadataTypeDef
ImportReadSetSourceItemTypeDef#
# ImportReadSetSourceItemTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ImportReadSetSourceItemTypeDef
def get_value() -> ImportReadSetSourceItemTypeDef:
return {
"sourceFiles": ...,
}
# ImportReadSetSourceItemTypeDef definition
class ImportReadSetSourceItemTypeDef(TypedDict):
sourceFiles: SourceFilesTypeDef, # (1)
sourceFileType: FileTypeType, # (2)
status: ReadSetImportJobItemStatusType, # (3)
subjectId: str,
sampleId: str,
statusMessage: NotRequired[str],
generatedFrom: NotRequired[str],
referenceArn: NotRequired[str],
name: NotRequired[str],
description: NotRequired[str],
tags: NotRequired[Dict[str, str]],
readSetId: NotRequired[str],StartReadSetImportJobSourceItemTypeDef#
# StartReadSetImportJobSourceItemTypeDef TypedDict usage example
from types_boto3_omics.type_defs import StartReadSetImportJobSourceItemTypeDef
def get_value() -> StartReadSetImportJobSourceItemTypeDef:
return {
"sourceFiles": ...,
}
# StartReadSetImportJobSourceItemTypeDef definition
class StartReadSetImportJobSourceItemTypeDef(TypedDict):
sourceFiles: SourceFilesTypeDef, # (1)
sourceFileType: FileTypeType, # (2)
subjectId: str,
sampleId: str,
generatedFrom: NotRequired[str],
referenceArn: NotRequired[str],
name: NotRequired[str],
description: NotRequired[str],
tags: NotRequired[Mapping[str, str]],- See SourceFilesTypeDef
- See FileTypeType
ListReferenceImportJobsResponseTypeDef#
# ListReferenceImportJobsResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListReferenceImportJobsResponseTypeDef
def get_value() -> ListReferenceImportJobsResponseTypeDef:
return {
"nextToken": ...,
}
# ListReferenceImportJobsResponseTypeDef definition
class ListReferenceImportJobsResponseTypeDef(TypedDict):
importJobs: List[ImportReferenceJobItemTypeDef], # (1)
ResponseMetadata: ResponseMetadataTypeDef, # (2)
nextToken: NotRequired[str],- See
List[ImportReferenceJobItemTypeDef] - See ResponseMetadataTypeDef
ListAnnotationImportJobsRequestTypeDef#
# ListAnnotationImportJobsRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListAnnotationImportJobsRequestTypeDef
def get_value() -> ListAnnotationImportJobsRequestTypeDef:
return {
"maxResults": ...,
}
# ListAnnotationImportJobsRequestTypeDef definition
class ListAnnotationImportJobsRequestTypeDef(TypedDict):
maxResults: NotRequired[int],
ids: NotRequired[Sequence[str]],
nextToken: NotRequired[str],
filter: NotRequired[ListAnnotationImportJobsFilterTypeDef], # (1)ListAnnotationImportJobsRequestPaginateTypeDef#
# ListAnnotationImportJobsRequestPaginateTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListAnnotationImportJobsRequestPaginateTypeDef
def get_value() -> ListAnnotationImportJobsRequestPaginateTypeDef:
return {
"ids": ...,
}
# ListAnnotationImportJobsRequestPaginateTypeDef definition
class ListAnnotationImportJobsRequestPaginateTypeDef(TypedDict):
ids: NotRequired[Sequence[str]],
filter: NotRequired[ListAnnotationImportJobsFilterTypeDef], # (1)
PaginationConfig: NotRequired[PaginatorConfigTypeDef], # (2)ListMultipartReadSetUploadsRequestPaginateTypeDef#
# ListMultipartReadSetUploadsRequestPaginateTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListMultipartReadSetUploadsRequestPaginateTypeDef
def get_value() -> ListMultipartReadSetUploadsRequestPaginateTypeDef:
return {
"sequenceStoreId": ...,
}
# ListMultipartReadSetUploadsRequestPaginateTypeDef definition
class ListMultipartReadSetUploadsRequestPaginateTypeDef(TypedDict):
sequenceStoreId: str,
PaginationConfig: NotRequired[PaginatorConfigTypeDef], # (1)ListRunCachesRequestPaginateTypeDef#
# ListRunCachesRequestPaginateTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListRunCachesRequestPaginateTypeDef
def get_value() -> ListRunCachesRequestPaginateTypeDef:
return {
"PaginationConfig": ...,
}
# ListRunCachesRequestPaginateTypeDef definition
class ListRunCachesRequestPaginateTypeDef(TypedDict):
PaginationConfig: NotRequired[PaginatorConfigTypeDef], # (1)ListRunGroupsRequestPaginateTypeDef#
# ListRunGroupsRequestPaginateTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListRunGroupsRequestPaginateTypeDef
def get_value() -> ListRunGroupsRequestPaginateTypeDef:
return {
"name": ...,
}
# ListRunGroupsRequestPaginateTypeDef definition
class ListRunGroupsRequestPaginateTypeDef(TypedDict):
name: NotRequired[str],
PaginationConfig: NotRequired[PaginatorConfigTypeDef], # (1)ListRunTasksRequestPaginateTypeDef#
# ListRunTasksRequestPaginateTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListRunTasksRequestPaginateTypeDef
def get_value() -> ListRunTasksRequestPaginateTypeDef:
return {
"id": ...,
}
# ListRunTasksRequestPaginateTypeDef definition
class ListRunTasksRequestPaginateTypeDef(TypedDict):
id: str,
status: NotRequired[TaskStatusType], # (1)
PaginationConfig: NotRequired[PaginatorConfigTypeDef], # (2)- See TaskStatusType
- See PaginatorConfigTypeDef
ListRunsRequestPaginateTypeDef#
# ListRunsRequestPaginateTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListRunsRequestPaginateTypeDef
def get_value() -> ListRunsRequestPaginateTypeDef:
return {
"name": ...,
}
# ListRunsRequestPaginateTypeDef definition
class ListRunsRequestPaginateTypeDef(TypedDict):
name: NotRequired[str],
runGroupId: NotRequired[str],
status: NotRequired[RunStatusType], # (1)
PaginationConfig: NotRequired[PaginatorConfigTypeDef], # (2)- See RunStatusType
- See PaginatorConfigTypeDef
ListSharesRequestPaginateTypeDef#
# ListSharesRequestPaginateTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListSharesRequestPaginateTypeDef
def get_value() -> ListSharesRequestPaginateTypeDef:
return {
"resourceOwner": ...,
}
# ListSharesRequestPaginateTypeDef definition
class ListSharesRequestPaginateTypeDef(TypedDict):
resourceOwner: ResourceOwnerType, # (1)
filter: NotRequired[FilterTypeDef], # (2)
PaginationConfig: NotRequired[PaginatorConfigTypeDef], # (3)- See ResourceOwnerType
- See FilterTypeDef
- See PaginatorConfigTypeDef
ListWorkflowVersionsRequestPaginateTypeDef#
# ListWorkflowVersionsRequestPaginateTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListWorkflowVersionsRequestPaginateTypeDef
def get_value() -> ListWorkflowVersionsRequestPaginateTypeDef:
return {
"workflowId": ...,
}
# ListWorkflowVersionsRequestPaginateTypeDef definition
class ListWorkflowVersionsRequestPaginateTypeDef(TypedDict):
workflowId: str,
type: NotRequired[WorkflowTypeType], # (1)
workflowOwnerId: NotRequired[str],
PaginationConfig: NotRequired[PaginatorConfigTypeDef], # (2)ListWorkflowsRequestPaginateTypeDef#
# ListWorkflowsRequestPaginateTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListWorkflowsRequestPaginateTypeDef
def get_value() -> ListWorkflowsRequestPaginateTypeDef:
return {
"type": ...,
}
# ListWorkflowsRequestPaginateTypeDef definition
class ListWorkflowsRequestPaginateTypeDef(TypedDict):
type: NotRequired[WorkflowTypeType], # (1)
name: NotRequired[str],
PaginationConfig: NotRequired[PaginatorConfigTypeDef], # (2)ListAnnotationStoreVersionsRequestPaginateTypeDef#
# ListAnnotationStoreVersionsRequestPaginateTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListAnnotationStoreVersionsRequestPaginateTypeDef
def get_value() -> ListAnnotationStoreVersionsRequestPaginateTypeDef:
return {
"name": ...,
}
# ListAnnotationStoreVersionsRequestPaginateTypeDef definition
class ListAnnotationStoreVersionsRequestPaginateTypeDef(TypedDict):
name: str,
filter: NotRequired[ListAnnotationStoreVersionsFilterTypeDef], # (1)
PaginationConfig: NotRequired[PaginatorConfigTypeDef], # (2)ListAnnotationStoreVersionsRequestTypeDef#
# ListAnnotationStoreVersionsRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListAnnotationStoreVersionsRequestTypeDef
def get_value() -> ListAnnotationStoreVersionsRequestTypeDef:
return {
"name": ...,
}
# ListAnnotationStoreVersionsRequestTypeDef definition
class ListAnnotationStoreVersionsRequestTypeDef(TypedDict):
name: str,
maxResults: NotRequired[int],
nextToken: NotRequired[str],
filter: NotRequired[ListAnnotationStoreVersionsFilterTypeDef], # (1)ListAnnotationStoresRequestPaginateTypeDef#
# ListAnnotationStoresRequestPaginateTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListAnnotationStoresRequestPaginateTypeDef
def get_value() -> ListAnnotationStoresRequestPaginateTypeDef:
return {
"ids": ...,
}
# ListAnnotationStoresRequestPaginateTypeDef definition
class ListAnnotationStoresRequestPaginateTypeDef(TypedDict):
ids: NotRequired[Sequence[str]],
filter: NotRequired[ListAnnotationStoresFilterTypeDef], # (1)
PaginationConfig: NotRequired[PaginatorConfigTypeDef], # (2)ListAnnotationStoresRequestTypeDef#
# ListAnnotationStoresRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListAnnotationStoresRequestTypeDef
def get_value() -> ListAnnotationStoresRequestTypeDef:
return {
"ids": ...,
}
# ListAnnotationStoresRequestTypeDef definition
class ListAnnotationStoresRequestTypeDef(TypedDict):
ids: NotRequired[Sequence[str]],
maxResults: NotRequired[int],
nextToken: NotRequired[str],
filter: NotRequired[ListAnnotationStoresFilterTypeDef], # (1)ListMultipartReadSetUploadsResponseTypeDef#
# ListMultipartReadSetUploadsResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListMultipartReadSetUploadsResponseTypeDef
def get_value() -> ListMultipartReadSetUploadsResponseTypeDef:
return {
"nextToken": ...,
}
# ListMultipartReadSetUploadsResponseTypeDef definition
class ListMultipartReadSetUploadsResponseTypeDef(TypedDict):
uploads: List[MultipartReadSetUploadListItemTypeDef], # (1)
ResponseMetadata: ResponseMetadataTypeDef, # (2)
nextToken: NotRequired[str],- See
List[MultipartReadSetUploadListItemTypeDef] - See ResponseMetadataTypeDef
ListReadSetUploadPartsResponseTypeDef#
# ListReadSetUploadPartsResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListReadSetUploadPartsResponseTypeDef
def get_value() -> ListReadSetUploadPartsResponseTypeDef:
return {
"nextToken": ...,
}
# ListReadSetUploadPartsResponseTypeDef definition
class ListReadSetUploadPartsResponseTypeDef(TypedDict):
parts: List[ReadSetUploadPartListItemTypeDef], # (1)
ResponseMetadata: ResponseMetadataTypeDef, # (2)
nextToken: NotRequired[str],- See
List[ReadSetUploadPartListItemTypeDef] - See ResponseMetadataTypeDef
ListReferencesResponseTypeDef#
# ListReferencesResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListReferencesResponseTypeDef
def get_value() -> ListReferencesResponseTypeDef:
return {
"nextToken": ...,
}
# ListReferencesResponseTypeDef definition
class ListReferencesResponseTypeDef(TypedDict):
references: List[ReferenceListItemTypeDef], # (1)
ResponseMetadata: ResponseMetadataTypeDef, # (2)
nextToken: NotRequired[str],- See
List[ReferenceListItemTypeDef] - See ResponseMetadataTypeDef
ListRunCachesResponseTypeDef#
# ListRunCachesResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListRunCachesResponseTypeDef
def get_value() -> ListRunCachesResponseTypeDef:
return {
"items": ...,
}
# ListRunCachesResponseTypeDef definition
class ListRunCachesResponseTypeDef(TypedDict):
items: List[RunCacheListItemTypeDef], # (1)
ResponseMetadata: ResponseMetadataTypeDef, # (2)
nextToken: NotRequired[str],- See
List[RunCacheListItemTypeDef] - See ResponseMetadataTypeDef
ListRunGroupsResponseTypeDef#
# ListRunGroupsResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListRunGroupsResponseTypeDef
def get_value() -> ListRunGroupsResponseTypeDef:
return {
"items": ...,
}
# ListRunGroupsResponseTypeDef definition
class ListRunGroupsResponseTypeDef(TypedDict):
items: List[RunGroupListItemTypeDef], # (1)
ResponseMetadata: ResponseMetadataTypeDef, # (2)
nextToken: NotRequired[str],- See
List[RunGroupListItemTypeDef] - See ResponseMetadataTypeDef
ListRunTasksResponseTypeDef#
# ListRunTasksResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListRunTasksResponseTypeDef
def get_value() -> ListRunTasksResponseTypeDef:
return {
"items": ...,
}
# ListRunTasksResponseTypeDef definition
class ListRunTasksResponseTypeDef(TypedDict):
items: List[TaskListItemTypeDef], # (1)
ResponseMetadata: ResponseMetadataTypeDef, # (2)
nextToken: NotRequired[str],- See
List[TaskListItemTypeDef] - See ResponseMetadataTypeDef
ListRunsResponseTypeDef#
# ListRunsResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListRunsResponseTypeDef
def get_value() -> ListRunsResponseTypeDef:
return {
"items": ...,
}
# ListRunsResponseTypeDef definition
class ListRunsResponseTypeDef(TypedDict):
items: List[RunListItemTypeDef], # (1)
ResponseMetadata: ResponseMetadataTypeDef, # (2)
nextToken: NotRequired[str],- See
List[RunListItemTypeDef] - See ResponseMetadataTypeDef
ListVariantImportJobsRequestPaginateTypeDef#
# ListVariantImportJobsRequestPaginateTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListVariantImportJobsRequestPaginateTypeDef
def get_value() -> ListVariantImportJobsRequestPaginateTypeDef:
return {
"ids": ...,
}
# ListVariantImportJobsRequestPaginateTypeDef definition
class ListVariantImportJobsRequestPaginateTypeDef(TypedDict):
ids: NotRequired[Sequence[str]],
filter: NotRequired[ListVariantImportJobsFilterTypeDef], # (1)
PaginationConfig: NotRequired[PaginatorConfigTypeDef], # (2)ListVariantImportJobsRequestTypeDef#
# ListVariantImportJobsRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListVariantImportJobsRequestTypeDef
def get_value() -> ListVariantImportJobsRequestTypeDef:
return {
"maxResults": ...,
}
# ListVariantImportJobsRequestTypeDef definition
class ListVariantImportJobsRequestTypeDef(TypedDict):
maxResults: NotRequired[int],
ids: NotRequired[Sequence[str]],
nextToken: NotRequired[str],
filter: NotRequired[ListVariantImportJobsFilterTypeDef], # (1)ListVariantImportJobsResponseTypeDef#
# ListVariantImportJobsResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListVariantImportJobsResponseTypeDef
def get_value() -> ListVariantImportJobsResponseTypeDef:
return {
"variantImportJobs": ...,
}
# ListVariantImportJobsResponseTypeDef definition
class ListVariantImportJobsResponseTypeDef(TypedDict):
variantImportJobs: List[VariantImportJobItemTypeDef], # (1)
ResponseMetadata: ResponseMetadataTypeDef, # (2)
nextToken: NotRequired[str],- See
List[VariantImportJobItemTypeDef] - See ResponseMetadataTypeDef
ListVariantStoresRequestPaginateTypeDef#
# ListVariantStoresRequestPaginateTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListVariantStoresRequestPaginateTypeDef
def get_value() -> ListVariantStoresRequestPaginateTypeDef:
return {
"ids": ...,
}
# ListVariantStoresRequestPaginateTypeDef definition
class ListVariantStoresRequestPaginateTypeDef(TypedDict):
ids: NotRequired[Sequence[str]],
filter: NotRequired[ListVariantStoresFilterTypeDef], # (1)
PaginationConfig: NotRequired[PaginatorConfigTypeDef], # (2)ListVariantStoresRequestTypeDef#
# ListVariantStoresRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListVariantStoresRequestTypeDef
def get_value() -> ListVariantStoresRequestTypeDef:
return {
"maxResults": ...,
}
# ListVariantStoresRequestTypeDef definition
class ListVariantStoresRequestTypeDef(TypedDict):
maxResults: NotRequired[int],
ids: NotRequired[Sequence[str]],
nextToken: NotRequired[str],
filter: NotRequired[ListVariantStoresFilterTypeDef], # (1)ListWorkflowVersionsResponseTypeDef#
# ListWorkflowVersionsResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListWorkflowVersionsResponseTypeDef
def get_value() -> ListWorkflowVersionsResponseTypeDef:
return {
"items": ...,
}
# ListWorkflowVersionsResponseTypeDef definition
class ListWorkflowVersionsResponseTypeDef(TypedDict):
items: List[WorkflowVersionListItemTypeDef], # (1)
ResponseMetadata: ResponseMetadataTypeDef, # (2)
nextToken: NotRequired[str],- See
List[WorkflowVersionListItemTypeDef] - See ResponseMetadataTypeDef
ListWorkflowsResponseTypeDef#
# ListWorkflowsResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListWorkflowsResponseTypeDef
def get_value() -> ListWorkflowsResponseTypeDef:
return {
"items": ...,
}
# ListWorkflowsResponseTypeDef definition
class ListWorkflowsResponseTypeDef(TypedDict):
items: List[WorkflowListItemTypeDef], # (1)
ResponseMetadata: ResponseMetadataTypeDef, # (2)
nextToken: NotRequired[str],- See
List[WorkflowListItemTypeDef] - See ResponseMetadataTypeDef
TsvOptionsTypeDef#
# TsvOptionsTypeDef TypedDict usage example
from types_boto3_omics.type_defs import TsvOptionsTypeDef
def get_value() -> TsvOptionsTypeDef:
return {
"readOptions": ...,
}
# TsvOptionsTypeDef definition
class TsvOptionsTypeDef(TypedDict):
readOptions: NotRequired[ReadOptionsTypeDef], # (1)StartReadSetActivationJobRequestTypeDef#
# StartReadSetActivationJobRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import StartReadSetActivationJobRequestTypeDef
def get_value() -> StartReadSetActivationJobRequestTypeDef:
return {
"sequenceStoreId": ...,
}
# StartReadSetActivationJobRequestTypeDef definition
class StartReadSetActivationJobRequestTypeDef(TypedDict):
sequenceStoreId: str,
sources: Sequence[StartReadSetActivationJobSourceItemTypeDef], # (1)
clientToken: NotRequired[str],- See
Sequence[StartReadSetActivationJobSourceItemTypeDef]
StartReferenceImportJobRequestTypeDef#
# StartReferenceImportJobRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import StartReferenceImportJobRequestTypeDef
def get_value() -> StartReferenceImportJobRequestTypeDef:
return {
"referenceStoreId": ...,
}
# StartReferenceImportJobRequestTypeDef definition
class StartReferenceImportJobRequestTypeDef(TypedDict):
referenceStoreId: str,
roleArn: str,
sources: Sequence[StartReferenceImportJobSourceItemTypeDef], # (1)
clientToken: NotRequired[str],- See
Sequence[StartReferenceImportJobSourceItemTypeDef]
StartVariantImportRequestTypeDef#
# StartVariantImportRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import StartVariantImportRequestTypeDef
def get_value() -> StartVariantImportRequestTypeDef:
return {
"destinationName": ...,
}
# StartVariantImportRequestTypeDef definition
class StartVariantImportRequestTypeDef(TypedDict):
destinationName: str,
roleArn: str,
items: Sequence[VariantImportItemSourceTypeDef], # (1)
runLeftNormalization: NotRequired[bool],
annotationFields: NotRequired[Mapping[str, str]],- See
Sequence[VariantImportItemSourceTypeDef]
StoreOptionsOutputTypeDef#
# StoreOptionsOutputTypeDef TypedDict usage example
from types_boto3_omics.type_defs import StoreOptionsOutputTypeDef
def get_value() -> StoreOptionsOutputTypeDef:
return {
"tsvStoreOptions": ...,
}
# StoreOptionsOutputTypeDef definition
class StoreOptionsOutputTypeDef(TypedDict):
tsvStoreOptions: NotRequired[TsvStoreOptionsOutputTypeDef], # (1)StoreOptionsTypeDef#
# StoreOptionsTypeDef TypedDict usage example
from types_boto3_omics.type_defs import StoreOptionsTypeDef
def get_value() -> StoreOptionsTypeDef:
return {
"tsvStoreOptions": ...,
}
# StoreOptionsTypeDef definition
class StoreOptionsTypeDef(TypedDict):
tsvStoreOptions: NotRequired[TsvStoreOptionsTypeDef], # (1)VersionOptionsOutputTypeDef#
# VersionOptionsOutputTypeDef TypedDict usage example
from types_boto3_omics.type_defs import VersionOptionsOutputTypeDef
def get_value() -> VersionOptionsOutputTypeDef:
return {
"tsvVersionOptions": ...,
}
# VersionOptionsOutputTypeDef definition
class VersionOptionsOutputTypeDef(TypedDict):
tsvVersionOptions: NotRequired[TsvVersionOptionsOutputTypeDef], # (1)VersionOptionsTypeDef#
# VersionOptionsTypeDef TypedDict usage example
from types_boto3_omics.type_defs import VersionOptionsTypeDef
def get_value() -> VersionOptionsTypeDef:
return {
"tsvVersionOptions": ...,
}
# VersionOptionsTypeDef definition
class VersionOptionsTypeDef(TypedDict):
tsvVersionOptions: NotRequired[TsvVersionOptionsTypeDef], # (1)ListReadSetActivationJobsRequestPaginateTypeDef#
# ListReadSetActivationJobsRequestPaginateTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListReadSetActivationJobsRequestPaginateTypeDef
def get_value() -> ListReadSetActivationJobsRequestPaginateTypeDef:
return {
"sequenceStoreId": ...,
}
# ListReadSetActivationJobsRequestPaginateTypeDef definition
class ListReadSetActivationJobsRequestPaginateTypeDef(TypedDict):
sequenceStoreId: str,
filter: NotRequired[ActivateReadSetFilterTypeDef], # (1)
PaginationConfig: NotRequired[PaginatorConfigTypeDef], # (2)ListReadSetActivationJobsRequestTypeDef#
# ListReadSetActivationJobsRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListReadSetActivationJobsRequestTypeDef
def get_value() -> ListReadSetActivationJobsRequestTypeDef:
return {
"sequenceStoreId": ...,
}
# ListReadSetActivationJobsRequestTypeDef definition
class ListReadSetActivationJobsRequestTypeDef(TypedDict):
sequenceStoreId: str,
maxResults: NotRequired[int],
nextToken: NotRequired[str],
filter: NotRequired[ActivateReadSetFilterTypeDef], # (1)ListReadSetExportJobsRequestPaginateTypeDef#
# ListReadSetExportJobsRequestPaginateTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListReadSetExportJobsRequestPaginateTypeDef
def get_value() -> ListReadSetExportJobsRequestPaginateTypeDef:
return {
"sequenceStoreId": ...,
}
# ListReadSetExportJobsRequestPaginateTypeDef definition
class ListReadSetExportJobsRequestPaginateTypeDef(TypedDict):
sequenceStoreId: str,
filter: NotRequired[ExportReadSetFilterTypeDef], # (1)
PaginationConfig: NotRequired[PaginatorConfigTypeDef], # (2)ListReadSetExportJobsRequestTypeDef#
# ListReadSetExportJobsRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListReadSetExportJobsRequestTypeDef
def get_value() -> ListReadSetExportJobsRequestTypeDef:
return {
"sequenceStoreId": ...,
}
# ListReadSetExportJobsRequestTypeDef definition
class ListReadSetExportJobsRequestTypeDef(TypedDict):
sequenceStoreId: str,
maxResults: NotRequired[int],
nextToken: NotRequired[str],
filter: NotRequired[ExportReadSetFilterTypeDef], # (1)ListReadSetImportJobsRequestPaginateTypeDef#
# ListReadSetImportJobsRequestPaginateTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListReadSetImportJobsRequestPaginateTypeDef
def get_value() -> ListReadSetImportJobsRequestPaginateTypeDef:
return {
"sequenceStoreId": ...,
}
# ListReadSetImportJobsRequestPaginateTypeDef definition
class ListReadSetImportJobsRequestPaginateTypeDef(TypedDict):
sequenceStoreId: str,
filter: NotRequired[ImportReadSetFilterTypeDef], # (1)
PaginationConfig: NotRequired[PaginatorConfigTypeDef], # (2)ListReadSetImportJobsRequestTypeDef#
# ListReadSetImportJobsRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListReadSetImportJobsRequestTypeDef
def get_value() -> ListReadSetImportJobsRequestTypeDef:
return {
"sequenceStoreId": ...,
}
# ListReadSetImportJobsRequestTypeDef definition
class ListReadSetImportJobsRequestTypeDef(TypedDict):
sequenceStoreId: str,
maxResults: NotRequired[int],
nextToken: NotRequired[str],
filter: NotRequired[ImportReadSetFilterTypeDef], # (1)ListReferenceImportJobsRequestPaginateTypeDef#
# ListReferenceImportJobsRequestPaginateTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListReferenceImportJobsRequestPaginateTypeDef
def get_value() -> ListReferenceImportJobsRequestPaginateTypeDef:
return {
"referenceStoreId": ...,
}
# ListReferenceImportJobsRequestPaginateTypeDef definition
class ListReferenceImportJobsRequestPaginateTypeDef(TypedDict):
referenceStoreId: str,
filter: NotRequired[ImportReferenceFilterTypeDef], # (1)
PaginationConfig: NotRequired[PaginatorConfigTypeDef], # (2)ListReferenceImportJobsRequestTypeDef#
# ListReferenceImportJobsRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListReferenceImportJobsRequestTypeDef
def get_value() -> ListReferenceImportJobsRequestTypeDef:
return {
"referenceStoreId": ...,
}
# ListReferenceImportJobsRequestTypeDef definition
class ListReferenceImportJobsRequestTypeDef(TypedDict):
referenceStoreId: str,
maxResults: NotRequired[int],
nextToken: NotRequired[str],
filter: NotRequired[ImportReferenceFilterTypeDef], # (1)ListReadSetsRequestPaginateTypeDef#
# ListReadSetsRequestPaginateTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListReadSetsRequestPaginateTypeDef
def get_value() -> ListReadSetsRequestPaginateTypeDef:
return {
"sequenceStoreId": ...,
}
# ListReadSetsRequestPaginateTypeDef definition
class ListReadSetsRequestPaginateTypeDef(TypedDict):
sequenceStoreId: str,
filter: NotRequired[ReadSetFilterTypeDef], # (1)
PaginationConfig: NotRequired[PaginatorConfigTypeDef], # (2)ListReadSetsRequestTypeDef#
# ListReadSetsRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListReadSetsRequestTypeDef
def get_value() -> ListReadSetsRequestTypeDef:
return {
"sequenceStoreId": ...,
}
# ListReadSetsRequestTypeDef definition
class ListReadSetsRequestTypeDef(TypedDict):
sequenceStoreId: str,
maxResults: NotRequired[int],
nextToken: NotRequired[str],
filter: NotRequired[ReadSetFilterTypeDef], # (1)ListReadSetUploadPartsRequestPaginateTypeDef#
# ListReadSetUploadPartsRequestPaginateTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListReadSetUploadPartsRequestPaginateTypeDef
def get_value() -> ListReadSetUploadPartsRequestPaginateTypeDef:
return {
"sequenceStoreId": ...,
}
# ListReadSetUploadPartsRequestPaginateTypeDef definition
class ListReadSetUploadPartsRequestPaginateTypeDef(TypedDict):
sequenceStoreId: str,
uploadId: str,
partSource: ReadSetPartSourceType, # (1)
filter: NotRequired[ReadSetUploadPartListFilterTypeDef], # (2)
PaginationConfig: NotRequired[PaginatorConfigTypeDef], # (3)ListReadSetUploadPartsRequestTypeDef#
# ListReadSetUploadPartsRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListReadSetUploadPartsRequestTypeDef
def get_value() -> ListReadSetUploadPartsRequestTypeDef:
return {
"sequenceStoreId": ...,
}
# ListReadSetUploadPartsRequestTypeDef definition
class ListReadSetUploadPartsRequestTypeDef(TypedDict):
sequenceStoreId: str,
uploadId: str,
partSource: ReadSetPartSourceType, # (1)
maxResults: NotRequired[int],
nextToken: NotRequired[str],
filter: NotRequired[ReadSetUploadPartListFilterTypeDef], # (2)ListReferencesRequestPaginateTypeDef#
# ListReferencesRequestPaginateTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListReferencesRequestPaginateTypeDef
def get_value() -> ListReferencesRequestPaginateTypeDef:
return {
"referenceStoreId": ...,
}
# ListReferencesRequestPaginateTypeDef definition
class ListReferencesRequestPaginateTypeDef(TypedDict):
referenceStoreId: str,
filter: NotRequired[ReferenceFilterTypeDef], # (1)
PaginationConfig: NotRequired[PaginatorConfigTypeDef], # (2)ListReferencesRequestTypeDef#
# ListReferencesRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListReferencesRequestTypeDef
def get_value() -> ListReferencesRequestTypeDef:
return {
"referenceStoreId": ...,
}
# ListReferencesRequestTypeDef definition
class ListReferencesRequestTypeDef(TypedDict):
referenceStoreId: str,
maxResults: NotRequired[int],
nextToken: NotRequired[str],
filter: NotRequired[ReferenceFilterTypeDef], # (1)ListReferenceStoresRequestPaginateTypeDef#
# ListReferenceStoresRequestPaginateTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListReferenceStoresRequestPaginateTypeDef
def get_value() -> ListReferenceStoresRequestPaginateTypeDef:
return {
"filter": ...,
}
# ListReferenceStoresRequestPaginateTypeDef definition
class ListReferenceStoresRequestPaginateTypeDef(TypedDict):
filter: NotRequired[ReferenceStoreFilterTypeDef], # (1)
PaginationConfig: NotRequired[PaginatorConfigTypeDef], # (2)ListReferenceStoresRequestTypeDef#
# ListReferenceStoresRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListReferenceStoresRequestTypeDef
def get_value() -> ListReferenceStoresRequestTypeDef:
return {
"maxResults": ...,
}
# ListReferenceStoresRequestTypeDef definition
class ListReferenceStoresRequestTypeDef(TypedDict):
maxResults: NotRequired[int],
nextToken: NotRequired[str],
filter: NotRequired[ReferenceStoreFilterTypeDef], # (1)ListSequenceStoresRequestPaginateTypeDef#
# ListSequenceStoresRequestPaginateTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListSequenceStoresRequestPaginateTypeDef
def get_value() -> ListSequenceStoresRequestPaginateTypeDef:
return {
"filter": ...,
}
# ListSequenceStoresRequestPaginateTypeDef definition
class ListSequenceStoresRequestPaginateTypeDef(TypedDict):
filter: NotRequired[SequenceStoreFilterTypeDef], # (1)
PaginationConfig: NotRequired[PaginatorConfigTypeDef], # (2)ListSequenceStoresRequestTypeDef#
# ListSequenceStoresRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListSequenceStoresRequestTypeDef
def get_value() -> ListSequenceStoresRequestTypeDef:
return {
"maxResults": ...,
}
# ListSequenceStoresRequestTypeDef definition
class ListSequenceStoresRequestTypeDef(TypedDict):
maxResults: NotRequired[int],
nextToken: NotRequired[str],
filter: NotRequired[SequenceStoreFilterTypeDef], # (1)ListAnnotationStoresResponseTypeDef#
# ListAnnotationStoresResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListAnnotationStoresResponseTypeDef
def get_value() -> ListAnnotationStoresResponseTypeDef:
return {
"annotationStores": ...,
}
# ListAnnotationStoresResponseTypeDef definition
class ListAnnotationStoresResponseTypeDef(TypedDict):
annotationStores: List[AnnotationStoreItemTypeDef], # (1)
ResponseMetadata: ResponseMetadataTypeDef, # (2)
nextToken: NotRequired[str],- See
List[AnnotationStoreItemTypeDef] - See ResponseMetadataTypeDef
ListReferenceStoresResponseTypeDef#
# ListReferenceStoresResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListReferenceStoresResponseTypeDef
def get_value() -> ListReferenceStoresResponseTypeDef:
return {
"nextToken": ...,
}
# ListReferenceStoresResponseTypeDef definition
class ListReferenceStoresResponseTypeDef(TypedDict):
referenceStores: List[ReferenceStoreDetailTypeDef], # (1)
ResponseMetadata: ResponseMetadataTypeDef, # (2)
nextToken: NotRequired[str],- See
List[ReferenceStoreDetailTypeDef] - See ResponseMetadataTypeDef
ListSequenceStoresResponseTypeDef#
# ListSequenceStoresResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListSequenceStoresResponseTypeDef
def get_value() -> ListSequenceStoresResponseTypeDef:
return {
"nextToken": ...,
}
# ListSequenceStoresResponseTypeDef definition
class ListSequenceStoresResponseTypeDef(TypedDict):
sequenceStores: List[SequenceStoreDetailTypeDef], # (1)
ResponseMetadata: ResponseMetadataTypeDef, # (2)
nextToken: NotRequired[str],- See
List[SequenceStoreDetailTypeDef] - See ResponseMetadataTypeDef
ListVariantStoresResponseTypeDef#
# ListVariantStoresResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListVariantStoresResponseTypeDef
def get_value() -> ListVariantStoresResponseTypeDef:
return {
"variantStores": ...,
}
# ListVariantStoresResponseTypeDef definition
class ListVariantStoresResponseTypeDef(TypedDict):
variantStores: List[VariantStoreItemTypeDef], # (1)
ResponseMetadata: ResponseMetadataTypeDef, # (2)
nextToken: NotRequired[str],- See
List[VariantStoreItemTypeDef] - See ResponseMetadataTypeDef
GetWorkflowResponseTypeDef#
# GetWorkflowResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetWorkflowResponseTypeDef
def get_value() -> GetWorkflowResponseTypeDef:
return {
"arn": ...,
}
# GetWorkflowResponseTypeDef definition
class GetWorkflowResponseTypeDef(TypedDict):
arn: str,
id: str,
status: WorkflowStatusType, # (1)
type: WorkflowTypeType, # (2)
name: str,
description: str,
engine: WorkflowEngineType, # (3)
definition: str,
main: str,
digest: str,
parameterTemplate: Dict[str, WorkflowParameterTypeDef], # (4)
storageCapacity: int,
creationTime: datetime.datetime,
statusMessage: str,
tags: Dict[str, str],
metadata: Dict[str, str],
accelerators: AcceleratorsType, # (5)
storageType: StorageTypeType, # (6)
uuid: str,
containerRegistryMap: ContainerRegistryMapOutputTypeDef, # (7)
readme: str,
definitionRepositoryDetails: DefinitionRepositoryDetailsTypeDef, # (8)
readmePath: str,
ResponseMetadata: ResponseMetadataTypeDef, # (9)- See WorkflowStatusType
- See WorkflowTypeType
- See WorkflowEngineType
- See
Dict[str, WorkflowParameterTypeDef] - See AcceleratorsType
- See StorageTypeType
- See ContainerRegistryMapOutputTypeDef
- See DefinitionRepositoryDetailsTypeDef
- See ResponseMetadataTypeDef
GetWorkflowVersionResponseTypeDef#
# GetWorkflowVersionResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetWorkflowVersionResponseTypeDef
def get_value() -> GetWorkflowVersionResponseTypeDef:
return {
"arn": ...,
}
# GetWorkflowVersionResponseTypeDef definition
class GetWorkflowVersionResponseTypeDef(TypedDict):
arn: str,
workflowId: str,
versionName: str,
accelerators: AcceleratorsType, # (1)
creationTime: datetime.datetime,
description: str,
definition: str,
digest: str,
engine: WorkflowEngineType, # (2)
main: str,
metadata: Dict[str, str],
parameterTemplate: Dict[str, WorkflowParameterTypeDef], # (3)
status: WorkflowStatusType, # (4)
statusMessage: str,
storageType: StorageTypeType, # (5)
storageCapacity: int,
type: WorkflowTypeType, # (6)
tags: Dict[str, str],
uuid: str,
workflowBucketOwnerId: str,
containerRegistryMap: ContainerRegistryMapOutputTypeDef, # (7)
readme: str,
definitionRepositoryDetails: DefinitionRepositoryDetailsTypeDef, # (8)
readmePath: str,
ResponseMetadata: ResponseMetadataTypeDef, # (9)- See AcceleratorsType
- See WorkflowEngineType
- See
Dict[str, WorkflowParameterTypeDef] - See WorkflowStatusType
- See StorageTypeType
- See WorkflowTypeType
- See ContainerRegistryMapOutputTypeDef
- See DefinitionRepositoryDetailsTypeDef
- See ResponseMetadataTypeDef
ReadSetFilesTypeDef#
# ReadSetFilesTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ReadSetFilesTypeDef
def get_value() -> ReadSetFilesTypeDef:
return {
"source1": ...,
}
# ReadSetFilesTypeDef definition
class ReadSetFilesTypeDef(TypedDict):
source1: NotRequired[FileInformationTypeDef], # (1)
source2: NotRequired[FileInformationTypeDef], # (1)
index: NotRequired[FileInformationTypeDef], # (1)ReferenceFilesTypeDef#
# ReferenceFilesTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ReferenceFilesTypeDef
def get_value() -> ReferenceFilesTypeDef:
return {
"source": ...,
}
# ReferenceFilesTypeDef definition
class ReferenceFilesTypeDef(TypedDict):
source: NotRequired[FileInformationTypeDef], # (1)
index: NotRequired[FileInformationTypeDef], # (1)ListReadSetsResponseTypeDef#
# ListReadSetsResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import ListReadSetsResponseTypeDef
def get_value() -> ListReadSetsResponseTypeDef:
return {
"nextToken": ...,
}
# ListReadSetsResponseTypeDef definition
class ListReadSetsResponseTypeDef(TypedDict):
readSets: List[ReadSetListItemTypeDef], # (1)
ResponseMetadata: ResponseMetadataTypeDef, # (2)
nextToken: NotRequired[str],- See
List[ReadSetListItemTypeDef] - See ResponseMetadataTypeDef
GetReadSetImportJobResponseTypeDef#
# GetReadSetImportJobResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetReadSetImportJobResponseTypeDef
def get_value() -> GetReadSetImportJobResponseTypeDef:
return {
"id": ...,
}
# GetReadSetImportJobResponseTypeDef definition
class GetReadSetImportJobResponseTypeDef(TypedDict):
id: str,
sequenceStoreId: str,
roleArn: str,
status: ReadSetImportJobStatusType, # (1)
statusMessage: str,
creationTime: datetime.datetime,
completionTime: datetime.datetime,
sources: List[ImportReadSetSourceItemTypeDef], # (2)
ResponseMetadata: ResponseMetadataTypeDef, # (3)- See ReadSetImportJobStatusType
- See
List[ImportReadSetSourceItemTypeDef] - See ResponseMetadataTypeDef
StartReadSetImportJobRequestTypeDef#
# StartReadSetImportJobRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import StartReadSetImportJobRequestTypeDef
def get_value() -> StartReadSetImportJobRequestTypeDef:
return {
"sequenceStoreId": ...,
}
# StartReadSetImportJobRequestTypeDef definition
class StartReadSetImportJobRequestTypeDef(TypedDict):
sequenceStoreId: str,
roleArn: str,
sources: Sequence[StartReadSetImportJobSourceItemTypeDef], # (1)
clientToken: NotRequired[str],- See
Sequence[StartReadSetImportJobSourceItemTypeDef]
FormatOptionsTypeDef#
# FormatOptionsTypeDef TypedDict usage example
from types_boto3_omics.type_defs import FormatOptionsTypeDef
def get_value() -> FormatOptionsTypeDef:
return {
"tsvOptions": ...,
}
# FormatOptionsTypeDef definition
class FormatOptionsTypeDef(TypedDict):
tsvOptions: NotRequired[TsvOptionsTypeDef], # (1)
vcfOptions: NotRequired[VcfOptionsTypeDef], # (2)- See TsvOptionsTypeDef
- See VcfOptionsTypeDef
CreateAnnotationStoreResponseTypeDef#
# CreateAnnotationStoreResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import CreateAnnotationStoreResponseTypeDef
def get_value() -> CreateAnnotationStoreResponseTypeDef:
return {
"id": ...,
}
# CreateAnnotationStoreResponseTypeDef definition
class CreateAnnotationStoreResponseTypeDef(TypedDict):
id: str,
reference: ReferenceItemTypeDef, # (1)
storeFormat: StoreFormatType, # (2)
storeOptions: StoreOptionsOutputTypeDef, # (3)
status: StoreStatusType, # (4)
name: str,
versionName: str,
creationTime: datetime.datetime,
ResponseMetadata: ResponseMetadataTypeDef, # (5)- See ReferenceItemTypeDef
- See StoreFormatType
- See StoreOptionsOutputTypeDef
- See StoreStatusType
- See ResponseMetadataTypeDef
GetAnnotationStoreResponseTypeDef#
# GetAnnotationStoreResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetAnnotationStoreResponseTypeDef
def get_value() -> GetAnnotationStoreResponseTypeDef:
return {
"id": ...,
}
# GetAnnotationStoreResponseTypeDef definition
class GetAnnotationStoreResponseTypeDef(TypedDict):
id: str,
reference: ReferenceItemTypeDef, # (1)
status: StoreStatusType, # (2)
storeArn: str,
name: str,
description: str,
sseConfig: SseConfigTypeDef, # (3)
creationTime: datetime.datetime,
updateTime: datetime.datetime,
tags: Dict[str, str],
storeOptions: StoreOptionsOutputTypeDef, # (4)
storeFormat: StoreFormatType, # (5)
statusMessage: str,
storeSizeBytes: int,
numVersions: int,
ResponseMetadata: ResponseMetadataTypeDef, # (6)- See ReferenceItemTypeDef
- See StoreStatusType
- See SseConfigTypeDef
- See StoreOptionsOutputTypeDef
- See StoreFormatType
- See ResponseMetadataTypeDef
UpdateAnnotationStoreResponseTypeDef#
# UpdateAnnotationStoreResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import UpdateAnnotationStoreResponseTypeDef
def get_value() -> UpdateAnnotationStoreResponseTypeDef:
return {
"id": ...,
}
# UpdateAnnotationStoreResponseTypeDef definition
class UpdateAnnotationStoreResponseTypeDef(TypedDict):
id: str,
reference: ReferenceItemTypeDef, # (1)
status: StoreStatusType, # (2)
name: str,
description: str,
creationTime: datetime.datetime,
updateTime: datetime.datetime,
storeOptions: StoreOptionsOutputTypeDef, # (3)
storeFormat: StoreFormatType, # (4)
ResponseMetadata: ResponseMetadataTypeDef, # (5)- See ReferenceItemTypeDef
- See StoreStatusType
- See StoreOptionsOutputTypeDef
- See StoreFormatType
- See ResponseMetadataTypeDef
CreateAnnotationStoreVersionResponseTypeDef#
# CreateAnnotationStoreVersionResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import CreateAnnotationStoreVersionResponseTypeDef
def get_value() -> CreateAnnotationStoreVersionResponseTypeDef:
return {
"id": ...,
}
# CreateAnnotationStoreVersionResponseTypeDef definition
class CreateAnnotationStoreVersionResponseTypeDef(TypedDict):
id: str,
versionName: str,
storeId: str,
versionOptions: VersionOptionsOutputTypeDef, # (1)
name: str,
status: VersionStatusType, # (2)
creationTime: datetime.datetime,
ResponseMetadata: ResponseMetadataTypeDef, # (3)GetAnnotationStoreVersionResponseTypeDef#
# GetAnnotationStoreVersionResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetAnnotationStoreVersionResponseTypeDef
def get_value() -> GetAnnotationStoreVersionResponseTypeDef:
return {
"storeId": ...,
}
# GetAnnotationStoreVersionResponseTypeDef definition
class GetAnnotationStoreVersionResponseTypeDef(TypedDict):
storeId: str,
id: str,
status: VersionStatusType, # (1)
versionArn: str,
name: str,
versionName: str,
description: str,
creationTime: datetime.datetime,
updateTime: datetime.datetime,
tags: Dict[str, str],
versionOptions: VersionOptionsOutputTypeDef, # (2)
statusMessage: str,
versionSizeBytes: int,
ResponseMetadata: ResponseMetadataTypeDef, # (3)CreateWorkflowRequestTypeDef#
# CreateWorkflowRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import CreateWorkflowRequestTypeDef
def get_value() -> CreateWorkflowRequestTypeDef:
return {
"requestId": ...,
}
# CreateWorkflowRequestTypeDef definition
class CreateWorkflowRequestTypeDef(TypedDict):
requestId: str,
name: NotRequired[str],
description: NotRequired[str],
engine: NotRequired[WorkflowEngineType], # (1)
definitionZip: NotRequired[BlobTypeDef],
definitionUri: NotRequired[str],
main: NotRequired[str],
parameterTemplate: NotRequired[Mapping[str, WorkflowParameterTypeDef]], # (2)
storageCapacity: NotRequired[int],
tags: NotRequired[Mapping[str, str]],
accelerators: NotRequired[AcceleratorsType], # (3)
storageType: NotRequired[StorageTypeType], # (4)
containerRegistryMap: NotRequired[ContainerRegistryMapUnionTypeDef], # (5)
containerRegistryMapUri: NotRequired[str],
readmeMarkdown: NotRequired[str],
parameterTemplatePath: NotRequired[str],
readmePath: NotRequired[str],
definitionRepository: NotRequired[DefinitionRepositoryTypeDef], # (6)
workflowBucketOwnerId: NotRequired[str],
readmeUri: NotRequired[str],- See WorkflowEngineType
- See
Mapping[str, WorkflowParameterTypeDef] - See AcceleratorsType
- See StorageTypeType
- See ContainerRegistryMapUnionTypeDef
- See DefinitionRepositoryTypeDef
CreateWorkflowVersionRequestTypeDef#
# CreateWorkflowVersionRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import CreateWorkflowVersionRequestTypeDef
def get_value() -> CreateWorkflowVersionRequestTypeDef:
return {
"workflowId": ...,
}
# CreateWorkflowVersionRequestTypeDef definition
class CreateWorkflowVersionRequestTypeDef(TypedDict):
workflowId: str,
versionName: str,
requestId: str,
definitionZip: NotRequired[BlobTypeDef],
definitionUri: NotRequired[str],
accelerators: NotRequired[AcceleratorsType], # (1)
description: NotRequired[str],
engine: NotRequired[WorkflowEngineType], # (2)
main: NotRequired[str],
parameterTemplate: NotRequired[Mapping[str, WorkflowParameterTypeDef]], # (3)
storageType: NotRequired[StorageTypeType], # (4)
storageCapacity: NotRequired[int],
tags: NotRequired[Mapping[str, str]],
workflowBucketOwnerId: NotRequired[str],
containerRegistryMap: NotRequired[ContainerRegistryMapUnionTypeDef], # (5)
containerRegistryMapUri: NotRequired[str],
readmeMarkdown: NotRequired[str],
parameterTemplatePath: NotRequired[str],
readmePath: NotRequired[str],
definitionRepository: NotRequired[DefinitionRepositoryTypeDef], # (6)
readmeUri: NotRequired[str],- See AcceleratorsType
- See WorkflowEngineType
- See
Mapping[str, WorkflowParameterTypeDef] - See StorageTypeType
- See ContainerRegistryMapUnionTypeDef
- See DefinitionRepositoryTypeDef
GetReadSetMetadataResponseTypeDef#
# GetReadSetMetadataResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetReadSetMetadataResponseTypeDef
def get_value() -> GetReadSetMetadataResponseTypeDef:
return {
"id": ...,
}
# GetReadSetMetadataResponseTypeDef definition
class GetReadSetMetadataResponseTypeDef(TypedDict):
id: str,
arn: str,
sequenceStoreId: str,
subjectId: str,
sampleId: str,
status: ReadSetStatusType, # (1)
name: str,
description: str,
fileType: FileTypeType, # (2)
creationTime: datetime.datetime,
sequenceInformation: SequenceInformationTypeDef, # (3)
referenceArn: str,
files: ReadSetFilesTypeDef, # (4)
statusMessage: str,
creationType: CreationTypeType, # (5)
etag: ETagTypeDef, # (6)
creationJobId: str,
ResponseMetadata: ResponseMetadataTypeDef, # (7)- See ReadSetStatusType
- See FileTypeType
- See SequenceInformationTypeDef
- See ReadSetFilesTypeDef
- See CreationTypeType
- See ETagTypeDef
- See ResponseMetadataTypeDef
GetReferenceMetadataResponseTypeDef#
# GetReferenceMetadataResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetReferenceMetadataResponseTypeDef
def get_value() -> GetReferenceMetadataResponseTypeDef:
return {
"id": ...,
}
# GetReferenceMetadataResponseTypeDef definition
class GetReferenceMetadataResponseTypeDef(TypedDict):
id: str,
arn: str,
referenceStoreId: str,
md5: str,
status: ReferenceStatusType, # (1)
name: str,
description: str,
creationTime: datetime.datetime,
updateTime: datetime.datetime,
files: ReferenceFilesTypeDef, # (2)
creationType: ReferenceCreationTypeType, # (3)
creationJobId: str,
ResponseMetadata: ResponseMetadataTypeDef, # (4)- See ReferenceStatusType
- See ReferenceFilesTypeDef
- See ReferenceCreationTypeType
- See ResponseMetadataTypeDef
GetAnnotationImportResponseTypeDef#
# GetAnnotationImportResponseTypeDef TypedDict usage example
from types_boto3_omics.type_defs import GetAnnotationImportResponseTypeDef
def get_value() -> GetAnnotationImportResponseTypeDef:
return {
"id": ...,
}
# GetAnnotationImportResponseTypeDef definition
class GetAnnotationImportResponseTypeDef(TypedDict):
id: str,
destinationName: str,
versionName: str,
roleArn: str,
status: JobStatusType, # (1)
statusMessage: str,
creationTime: datetime.datetime,
updateTime: datetime.datetime,
completionTime: datetime.datetime,
items: List[AnnotationImportItemDetailTypeDef], # (2)
runLeftNormalization: bool,
formatOptions: FormatOptionsTypeDef, # (3)
annotationFields: Dict[str, str],
ResponseMetadata: ResponseMetadataTypeDef, # (4)- See JobStatusType
- See
List[AnnotationImportItemDetailTypeDef] - See FormatOptionsTypeDef
- See ResponseMetadataTypeDef
StartAnnotationImportRequestTypeDef#
# StartAnnotationImportRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import StartAnnotationImportRequestTypeDef
def get_value() -> StartAnnotationImportRequestTypeDef:
return {
"destinationName": ...,
}
# StartAnnotationImportRequestTypeDef definition
class StartAnnotationImportRequestTypeDef(TypedDict):
destinationName: str,
roleArn: str,
items: Sequence[AnnotationImportItemSourceTypeDef], # (1)
versionName: NotRequired[str],
formatOptions: NotRequired[FormatOptionsTypeDef], # (2)
runLeftNormalization: NotRequired[bool],
annotationFields: NotRequired[Mapping[str, str]],- See
Sequence[AnnotationImportItemSourceTypeDef] - See FormatOptionsTypeDef
CreateAnnotationStoreRequestTypeDef#
# CreateAnnotationStoreRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import CreateAnnotationStoreRequestTypeDef
def get_value() -> CreateAnnotationStoreRequestTypeDef:
return {
"storeFormat": ...,
}
# CreateAnnotationStoreRequestTypeDef definition
class CreateAnnotationStoreRequestTypeDef(TypedDict):
storeFormat: StoreFormatType, # (1)
reference: NotRequired[ReferenceItemTypeDef], # (2)
name: NotRequired[str],
description: NotRequired[str],
tags: NotRequired[Mapping[str, str]],
versionName: NotRequired[str],
sseConfig: NotRequired[SseConfigTypeDef], # (3)
storeOptions: NotRequired[StoreOptionsUnionTypeDef], # (4)- See StoreFormatType
- See ReferenceItemTypeDef
- See SseConfigTypeDef
- See StoreOptionsUnionTypeDef
CreateAnnotationStoreVersionRequestTypeDef#
# CreateAnnotationStoreVersionRequestTypeDef TypedDict usage example
from types_boto3_omics.type_defs import CreateAnnotationStoreVersionRequestTypeDef
def get_value() -> CreateAnnotationStoreVersionRequestTypeDef:
return {
"name": ...,
}
# CreateAnnotationStoreVersionRequestTypeDef definition
class CreateAnnotationStoreVersionRequestTypeDef(TypedDict):
name: str,
versionName: str,
description: NotRequired[str],
versionOptions: NotRequired[VersionOptionsUnionTypeDef], # (1)
tags: NotRequired[Mapping[str, str]],